Gene : Eucgr.G01193 E. grandis v2.0
Defline:  (1 of 1) 5.3.1.5 - Xylose isomerase / D-xylose ketoisomerase Genomic Order:  795
Name:  ? Eucgr.G01193 Secondary Identifier:  ? PAC:32070648
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01193 0.5kb upstream 0.5kb upstream 6845 true Chr07: 18223954-18230798 Eucalyptus grandis
Eucgr.G01193 0.5kb upstream 0.5kb upstream 500 false Chr07: 18223954-18224453 Eucalyptus grandis
Eucgr.G01193 0.5kb downstream 0.5kb downstream 6845 true Chr07: 18224454-18231298 Eucalyptus grandis
Eucgr.G01193 0.5kb downstream 0.5kb downstream 500 false Chr07: 18230799-18231298 Eucalyptus grandis
Eucgr.G01193 1.0kb upstream 1.0kb upstream 7345 true Chr07: 18223454-18230798 Eucalyptus grandis
Eucgr.G01193 1.0kb upstream 1.0kb upstream 1000 false Chr07: 18223454-18224453 Eucalyptus grandis
Eucgr.G01193 1.0kb downstream 1.0kb downstream 7345 true Chr07: 18224454-18231798 Eucalyptus grandis
Eucgr.G01193 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18230799-18231798 Eucalyptus grandis
Eucgr.G01193 2.0kb upstream 2.0kb upstream 8345 true Chr07: 18222454-18230798 Eucalyptus grandis
Eucgr.G01193 2.0kb upstream 2.0kb upstream 2000 false Chr07: 18222454-18224453 Eucalyptus grandis
Eucgr.G01193 2.0kb downstream 2.0kb downstream 8345 true Chr07: 18224454-18232798 Eucalyptus grandis
Eucgr.G01193 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18230799-18232798 Eucalyptus grandis
Eucgr.G01193 5.0kb upstream 5.0kb upstream 11345 true Chr07: 18219454-18230798 Eucalyptus grandis
Eucgr.G01193 5.0kb upstream 5.0kb upstream 5000 false Chr07: 18219454-18224453 Eucalyptus grandis
Eucgr.G01193 5.0kb downstream 5.0kb downstream 11345 true Chr07: 18224454-18235798 Eucalyptus grandis
Eucgr.G01193 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18230799-18235798 Eucalyptus grandis
Eucgr.G01193 10.0kb upstream 10.0kb upstream 16345 true Chr07: 18214454-18230798 Eucalyptus grandis
Eucgr.G01193 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18214454-18224453 Eucalyptus grandis
Eucgr.G01193 10.0kb downstream 10.0kb downstream 16345 true Chr07: 18224454-18240798 Eucalyptus grandis
Eucgr.G01193 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18230799-18240798 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066839 5270 Rosid View MSA
123746372 5271 Pentapetalae View MSA
122787328 5272 Eudicot View MSA
122044663 5273 Angiosperm View MSA
121345784 5274 Embryophyte View MSA
123425959 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.5302 0.0 93.0258 High  
cufflinks 13.3039 0.0 31.9833   Low
cufflinks 36.5795 0.0 95.1641 High  
cufflinks 19.5887 0.0 45.8445    
cufflinks 24.7992 0.0 55.6389    
cufflinks 48.0035 0.0 125.899 High High

0 Strain