Gene : Eucgr.G00651 E. grandis v2.0
Defline:  (1 of 6) PTHR30620:SF40 - BETA-D-XYLOSIDASE 3-RELATED Genomic Order:  379
Name:  ? Eucgr.G00651 Secondary Identifier:  ? PAC:32072438
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00651 0.5kb upstream 0.5kb upstream 5286 true Chr07: 9648815-9654100 Eucalyptus grandis
Eucgr.G00651 0.5kb upstream 0.5kb upstream 500 false Chr07: 9648815-9649314 Eucalyptus grandis
Eucgr.G00651 0.5kb downstream 0.5kb downstream 5286 true Chr07: 9649315-9654600 Eucalyptus grandis
Eucgr.G00651 0.5kb downstream 0.5kb downstream 500 false Chr07: 9654101-9654600 Eucalyptus grandis
Eucgr.G00651 1.0kb upstream 1.0kb upstream 5786 true Chr07: 9648315-9654100 Eucalyptus grandis
Eucgr.G00651 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9648315-9649314 Eucalyptus grandis
Eucgr.G00651 1.0kb downstream 1.0kb downstream 5786 true Chr07: 9649315-9655100 Eucalyptus grandis
Eucgr.G00651 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9654101-9655100 Eucalyptus grandis
Eucgr.G00651 2.0kb upstream 2.0kb upstream 6786 true Chr07: 9647315-9654100 Eucalyptus grandis
Eucgr.G00651 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9647315-9649314 Eucalyptus grandis
Eucgr.G00651 2.0kb downstream 2.0kb downstream 6786 true Chr07: 9649315-9656100 Eucalyptus grandis
Eucgr.G00651 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9654101-9656100 Eucalyptus grandis
Eucgr.G00651 5.0kb upstream 5.0kb upstream 9786 true Chr07: 9644315-9654100 Eucalyptus grandis
Eucgr.G00651 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9644315-9649314 Eucalyptus grandis
Eucgr.G00651 5.0kb downstream 5.0kb downstream 9786 true Chr07: 9649315-9659100 Eucalyptus grandis
Eucgr.G00651 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9654101-9659100 Eucalyptus grandis
Eucgr.G00651 10.0kb upstream 10.0kb upstream 14786 true Chr07: 9639315-9654100 Eucalyptus grandis
Eucgr.G00651 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9639315-9649314 Eucalyptus grandis
Eucgr.G00651 10.0kb downstream 10.0kb downstream 14786 true Chr07: 9649315-9664100 Eucalyptus grandis
Eucgr.G00651 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9654101-9664100 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062868 5270 Rosid View MSA
123737560 5271 Pentapetalae View MSA
122787733 5272 Eudicot View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43617 0.0 3.797    
cufflinks 0.51754 0.0 1.52701 Low  
cufflinks 1.88129 0.0 4.86673    
cufflinks 3.51751 0.0 8.54319   High
cufflinks 0.200552 0.0 0.663985 Low Low
cufflinks 0.531639 0.0 1.54751 Low  

0 Strain