Gene : Eucgr.G00784 E. grandis v2.0
Defline:  (1 of 66) PTHR23155//PTHR23155:SF554 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  484
Name:  ? Eucgr.G00784 Secondary Identifier:  ? PAC:32072566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00784 0.5kb upstream 0.5kb upstream 14327 true Chr07: 11933078-11947404 Eucalyptus grandis
Eucgr.G00784 0.5kb upstream 0.5kb upstream 500 false Chr07: 11933078-11933577 Eucalyptus grandis
Eucgr.G00784 0.5kb downstream 0.5kb downstream 14327 true Chr07: 11933578-11947904 Eucalyptus grandis
Eucgr.G00784 0.5kb downstream 0.5kb downstream 500 false Chr07: 11947405-11947904 Eucalyptus grandis
Eucgr.G00784 1.0kb upstream 1.0kb upstream 14827 true Chr07: 11932578-11947404 Eucalyptus grandis
Eucgr.G00784 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11932578-11933577 Eucalyptus grandis
Eucgr.G00784 1.0kb downstream 1.0kb downstream 14827 true Chr07: 11933578-11948404 Eucalyptus grandis
Eucgr.G00784 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11947405-11948404 Eucalyptus grandis
Eucgr.G00784 2.0kb upstream 2.0kb upstream 15827 true Chr07: 11931578-11947404 Eucalyptus grandis
Eucgr.G00784 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11931578-11933577 Eucalyptus grandis
Eucgr.G00784 2.0kb downstream 2.0kb downstream 15827 true Chr07: 11933578-11949404 Eucalyptus grandis
Eucgr.G00784 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11947405-11949404 Eucalyptus grandis
Eucgr.G00784 5.0kb upstream 5.0kb upstream 18827 true Chr07: 11928578-11947404 Eucalyptus grandis
Eucgr.G00784 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11928578-11933577 Eucalyptus grandis
Eucgr.G00784 5.0kb downstream 5.0kb downstream 18827 true Chr07: 11933578-11952404 Eucalyptus grandis
Eucgr.G00784 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11947405-11952404 Eucalyptus grandis
Eucgr.G00784 10.0kb upstream 10.0kb upstream 23827 true Chr07: 11923578-11947404 Eucalyptus grandis
Eucgr.G00784 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11923578-11933577 Eucalyptus grandis
Eucgr.G00784 10.0kb downstream 10.0kb downstream 23827 true Chr07: 11933578-11957404 Eucalyptus grandis
Eucgr.G00784 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11947405-11957404 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30794 0.0 3.21145    
cufflinks 1.74276 0.0 4.1305    
cufflinks 1.95196 0.0 4.59104    
cufflinks 0.895514 0.0 2.26307   Low
cufflinks 3.16213 0.0 7.18149   High
cufflinks 0.969457 0.0 2.46912    

0 Strain