Gene : Eucgr.F03952 E. grandis v2.0
Defline:  (1 of 1) PTHR21596:SF3 - F16A14.2-RELATED Genomic Order:  3511
Name:  ? Eucgr.F03952 Secondary Identifier:  ? PAC:32054921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03952 0.5kb upstream 0.5kb upstream 6137 true Chr06: 50341179-50347315 Eucalyptus grandis
Eucgr.F03952 0.5kb upstream 0.5kb upstream 500 false Chr06: 50341179-50341678 Eucalyptus grandis
Eucgr.F03952 0.5kb downstream 0.5kb downstream 6137 true Chr06: 50341679-50347815 Eucalyptus grandis
Eucgr.F03952 0.5kb downstream 0.5kb downstream 500 false Chr06: 50347316-50347815 Eucalyptus grandis
Eucgr.F03952 1.0kb upstream 1.0kb upstream 6637 true Chr06: 50340679-50347315 Eucalyptus grandis
Eucgr.F03952 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50340679-50341678 Eucalyptus grandis
Eucgr.F03952 1.0kb downstream 1.0kb downstream 6637 true Chr06: 50341679-50348315 Eucalyptus grandis
Eucgr.F03952 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50347316-50348315 Eucalyptus grandis
Eucgr.F03952 2.0kb upstream 2.0kb upstream 7637 true Chr06: 50339679-50347315 Eucalyptus grandis
Eucgr.F03952 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50339679-50341678 Eucalyptus grandis
Eucgr.F03952 2.0kb downstream 2.0kb downstream 7637 true Chr06: 50341679-50349315 Eucalyptus grandis
Eucgr.F03952 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50347316-50349315 Eucalyptus grandis
Eucgr.F03952 5.0kb upstream 5.0kb upstream 10637 true Chr06: 50336679-50347315 Eucalyptus grandis
Eucgr.F03952 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50336679-50341678 Eucalyptus grandis
Eucgr.F03952 5.0kb downstream 5.0kb downstream 10637 true Chr06: 50341679-50352315 Eucalyptus grandis
Eucgr.F03952 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50347316-50352315 Eucalyptus grandis
Eucgr.F03952 10.0kb upstream 10.0kb upstream 15637 true Chr06: 50331679-50347315 Eucalyptus grandis
Eucgr.F03952 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50331679-50341678 Eucalyptus grandis
Eucgr.F03952 10.0kb downstream 10.0kb downstream 15637 true Chr06: 50341679-50357315 Eucalyptus grandis
Eucgr.F03952 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50347316-50357315 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066468 5270 Rosid View MSA
123741762 5271 Pentapetalae View MSA
122795900 5272 Eudicot View MSA
122047890 5273 Angiosperm View MSA
121350157 5274 Embryophyte View MSA
123381596 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6034 0.0 32.9161    
cufflinks 13.9627 0.0 31.5051    
cufflinks 18.5717 0.0 45.9325   High
cufflinks 12.3527 0.0 30.6439    
cufflinks 13.2922 0.0 29.9299    
cufflinks 11.0513 0.0 25.1864   Low

0 Strain