Gene : Eucgr.F03266 E. grandis v2.0
Defline:  (1 of 2) PTHR31165:SF9 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-RELATED Genomic Order:  2907
Name:  ? Eucgr.F03266 Secondary Identifier:  ? PAC:32057310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03266 0.5kb upstream 0.5kb upstream 2693 true Chr06: 44288492-44291184 Eucalyptus grandis
Eucgr.F03266 0.5kb upstream 0.5kb upstream 500 false Chr06: 44288492-44288991 Eucalyptus grandis
Eucgr.F03266 0.5kb downstream 0.5kb downstream 2693 true Chr06: 44288992-44291684 Eucalyptus grandis
Eucgr.F03266 0.5kb downstream 0.5kb downstream 500 false Chr06: 44291185-44291684 Eucalyptus grandis
Eucgr.F03266 1.0kb upstream 1.0kb upstream 3193 true Chr06: 44287992-44291184 Eucalyptus grandis
Eucgr.F03266 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44287992-44288991 Eucalyptus grandis
Eucgr.F03266 1.0kb downstream 1.0kb downstream 3193 true Chr06: 44288992-44292184 Eucalyptus grandis
Eucgr.F03266 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44291185-44292184 Eucalyptus grandis
Eucgr.F03266 2.0kb upstream 2.0kb upstream 4193 true Chr06: 44286992-44291184 Eucalyptus grandis
Eucgr.F03266 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44286992-44288991 Eucalyptus grandis
Eucgr.F03266 2.0kb downstream 2.0kb downstream 4193 true Chr06: 44288992-44293184 Eucalyptus grandis
Eucgr.F03266 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44291185-44293184 Eucalyptus grandis
Eucgr.F03266 5.0kb upstream 5.0kb upstream 7193 true Chr06: 44283992-44291184 Eucalyptus grandis
Eucgr.F03266 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44283992-44288991 Eucalyptus grandis
Eucgr.F03266 5.0kb downstream 5.0kb downstream 7193 true Chr06: 44288992-44296184 Eucalyptus grandis
Eucgr.F03266 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44291185-44296184 Eucalyptus grandis
Eucgr.F03266 10.0kb upstream 10.0kb upstream 12193 true Chr06: 44278992-44291184 Eucalyptus grandis
Eucgr.F03266 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44278992-44288991 Eucalyptus grandis
Eucgr.F03266 10.0kb downstream 10.0kb downstream 12193 true Chr06: 44288992-44301184 Eucalyptus grandis
Eucgr.F03266 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44291185-44301184 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 54.5238 0.0 120.718 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 34.3326 0.0 76.1561    
cufflinks 117.443 0.0 266.452 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain