Gene : Eucgr.F03004 E. grandis v2.0
Defline:  (1 of 9) PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING Genomic Order:  2660
Name:  ? Eucgr.F03004 Secondary Identifier:  ? PAC:32054271
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03004 0.5kb upstream 0.5kb upstream 3704 true Chr06: 42172210-42175913 Eucalyptus grandis
Eucgr.F03004 0.5kb upstream 0.5kb upstream 500 false Chr06: 42172210-42172709 Eucalyptus grandis
Eucgr.F03004 0.5kb downstream 0.5kb downstream 3704 true Chr06: 42172710-42176413 Eucalyptus grandis
Eucgr.F03004 0.5kb downstream 0.5kb downstream 500 false Chr06: 42175914-42176413 Eucalyptus grandis
Eucgr.F03004 1.0kb upstream 1.0kb upstream 4204 true Chr06: 42171710-42175913 Eucalyptus grandis
Eucgr.F03004 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42171710-42172709 Eucalyptus grandis
Eucgr.F03004 1.0kb downstream 1.0kb downstream 4204 true Chr06: 42172710-42176913 Eucalyptus grandis
Eucgr.F03004 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42175914-42176913 Eucalyptus grandis
Eucgr.F03004 2.0kb upstream 2.0kb upstream 5204 true Chr06: 42170710-42175913 Eucalyptus grandis
Eucgr.F03004 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42170710-42172709 Eucalyptus grandis
Eucgr.F03004 2.0kb downstream 2.0kb downstream 5204 true Chr06: 42172710-42177913 Eucalyptus grandis
Eucgr.F03004 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42175914-42177913 Eucalyptus grandis
Eucgr.F03004 5.0kb upstream 5.0kb upstream 8204 true Chr06: 42167710-42175913 Eucalyptus grandis
Eucgr.F03004 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42167710-42172709 Eucalyptus grandis
Eucgr.F03004 5.0kb downstream 5.0kb downstream 8204 true Chr06: 42172710-42180913 Eucalyptus grandis
Eucgr.F03004 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42175914-42180913 Eucalyptus grandis
Eucgr.F03004 10.0kb upstream 10.0kb upstream 13204 true Chr06: 42162710-42175913 Eucalyptus grandis
Eucgr.F03004 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42162710-42172709 Eucalyptus grandis
Eucgr.F03004 10.0kb downstream 10.0kb downstream 13204 true Chr06: 42172710-42185913 Eucalyptus grandis
Eucgr.F03004 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42175914-42185913 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070460 5270 Rosid View MSA
123749973 5271 Pentapetalae View MSA
122790339 5272 Eudicot View MSA
122046925 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.24381 0.0 16.8325    
cufflinks 14.249 0.0 31.7381   High
cufflinks 6.09332 0.0 14.316    
cufflinks 12.6916 0.0 28.3675    
cufflinks 3.88317 0.0 9.5299   Low
cufflinks 8.41783 0.0 19.4003    

0 Strain