Gene : Eucgr.F02310 E. grandis v2.0
Defline:  (1 of 3) PTHR12411:SF344 - CYSTEINE PROTEASE COMPONENT OF PROTEASE-INHIBITOR COMPLEX-RELATED Genomic Order:  1888
Name:  ? Eucgr.F02310 Secondary Identifier:  ? PAC:32057699
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02310 0.5kb upstream 0.5kb upstream 4850 true Chr06: 31785462-31790311 Eucalyptus grandis
Eucgr.F02310 0.5kb upstream 0.5kb upstream 500 false Chr06: 31785462-31785961 Eucalyptus grandis
Eucgr.F02310 0.5kb downstream 0.5kb downstream 4850 true Chr06: 31785962-31790811 Eucalyptus grandis
Eucgr.F02310 0.5kb downstream 0.5kb downstream 500 false Chr06: 31790312-31790811 Eucalyptus grandis
Eucgr.F02310 1.0kb upstream 1.0kb upstream 5350 true Chr06: 31784962-31790311 Eucalyptus grandis
Eucgr.F02310 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31784962-31785961 Eucalyptus grandis
Eucgr.F02310 1.0kb downstream 1.0kb downstream 5350 true Chr06: 31785962-31791311 Eucalyptus grandis
Eucgr.F02310 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31790312-31791311 Eucalyptus grandis
Eucgr.F02310 2.0kb upstream 2.0kb upstream 6350 true Chr06: 31783962-31790311 Eucalyptus grandis
Eucgr.F02310 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31783962-31785961 Eucalyptus grandis
Eucgr.F02310 2.0kb downstream 2.0kb downstream 6350 true Chr06: 31785962-31792311 Eucalyptus grandis
Eucgr.F02310 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31790312-31792311 Eucalyptus grandis
Eucgr.F02310 5.0kb upstream 5.0kb upstream 9350 true Chr06: 31780962-31790311 Eucalyptus grandis
Eucgr.F02310 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31780962-31785961 Eucalyptus grandis
Eucgr.F02310 5.0kb downstream 5.0kb downstream 9350 true Chr06: 31785962-31795311 Eucalyptus grandis
Eucgr.F02310 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31790312-31795311 Eucalyptus grandis
Eucgr.F02310 10.0kb upstream 10.0kb upstream 14350 true Chr06: 31775962-31790311 Eucalyptus grandis
Eucgr.F02310 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31775962-31785961 Eucalyptus grandis
Eucgr.F02310 10.0kb downstream 10.0kb downstream 14350 true Chr06: 31785962-31800311 Eucalyptus grandis
Eucgr.F02310 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31790312-31800311 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071516 5270 Rosid View MSA
123751389 5271 Pentapetalae View MSA
122796567 5272 Eudicot View MSA
122043914 5273 Angiosperm View MSA
123428950 5275 Viridiplantae View MSA
121348634 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.8547 0.0 164.263 High  
cufflinks 27.3186 0.0 61.559   Low
cufflinks 78.4049 0.0 217.725 High High
cufflinks 31.925 0.0 72.7158    
cufflinks 30.0132 0.0 68.0081    
cufflinks 71.6845 0.0 164.188 High  

0 Strain