Gene : Eucgr.F01474 E. grandis v2.0
Defline:  (1 of 1) PTHR10252:SF48 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED Genomic Order:  1256
Name:  ? Eucgr.F01474 Secondary Identifier:  ? PAC:32055084
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01474 0.5kb upstream 0.5kb upstream 2882 true Chr06: 19880808-19883689 Eucalyptus grandis
Eucgr.F01474 0.5kb upstream 0.5kb upstream 500 false Chr06: 19880808-19881307 Eucalyptus grandis
Eucgr.F01474 0.5kb downstream 0.5kb downstream 2882 true Chr06: 19881308-19884189 Eucalyptus grandis
Eucgr.F01474 0.5kb downstream 0.5kb downstream 500 false Chr06: 19883690-19884189 Eucalyptus grandis
Eucgr.F01474 1.0kb upstream 1.0kb upstream 3382 true Chr06: 19880308-19883689 Eucalyptus grandis
Eucgr.F01474 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19880308-19881307 Eucalyptus grandis
Eucgr.F01474 1.0kb downstream 1.0kb downstream 3382 true Chr06: 19881308-19884689 Eucalyptus grandis
Eucgr.F01474 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19883690-19884689 Eucalyptus grandis
Eucgr.F01474 2.0kb upstream 2.0kb upstream 4382 true Chr06: 19879308-19883689 Eucalyptus grandis
Eucgr.F01474 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19879308-19881307 Eucalyptus grandis
Eucgr.F01474 2.0kb downstream 2.0kb downstream 4382 true Chr06: 19881308-19885689 Eucalyptus grandis
Eucgr.F01474 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19883690-19885689 Eucalyptus grandis
Eucgr.F01474 5.0kb upstream 5.0kb upstream 7382 true Chr06: 19876308-19883689 Eucalyptus grandis
Eucgr.F01474 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19876308-19881307 Eucalyptus grandis
Eucgr.F01474 5.0kb downstream 5.0kb downstream 7382 true Chr06: 19881308-19888689 Eucalyptus grandis
Eucgr.F01474 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19883690-19888689 Eucalyptus grandis
Eucgr.F01474 10.0kb upstream 10.0kb upstream 12382 true Chr06: 19871308-19883689 Eucalyptus grandis
Eucgr.F01474 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19871308-19881307 Eucalyptus grandis
Eucgr.F01474 10.0kb downstream 10.0kb downstream 12382 true Chr06: 19881308-19893689 Eucalyptus grandis
Eucgr.F01474 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19883690-19893689 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067484 5270 Rosid View MSA
123752429 5271 Pentapetalae View MSA
122774553 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.4623 0.0 16.2109   Low
cufflinks 15.6753 0.0 40.3946   High
cufflinks 10.4759 0.0 29.029    
cufflinks 10.8886 0.0 29.6757    
cufflinks 14.7743 0.0 36.4319    
cufflinks 8.64113 0.0 24.3369    

0 Strain