Gene : Eucgr.C02093 E. grandis v2.0
Defline:  (1 of 1) PTHR10410:SF6 - COP9 SIGNALOSOME COMPLEX SUBUNIT 5 Genomic Order:  1648
Name:  ? Eucgr.C02093 Secondary Identifier:  ? PAC:32039341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02093 0.5kb upstream 0.5kb upstream 3818 true Chr03: 38939724-38943541 Eucalyptus grandis
Eucgr.C02093 0.5kb upstream 0.5kb upstream 500 false Chr03: 38943042-38943541 Eucalyptus grandis
Eucgr.C02093 0.5kb downstream 0.5kb downstream 3818 true Chr03: 38939224-38943041 Eucalyptus grandis
Eucgr.C02093 0.5kb downstream 0.5kb downstream 500 false Chr03: 38939224-38939723 Eucalyptus grandis
Eucgr.C02093 1.0kb upstream 1.0kb upstream 4318 true Chr03: 38939724-38944041 Eucalyptus grandis
Eucgr.C02093 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38943042-38944041 Eucalyptus grandis
Eucgr.C02093 1.0kb downstream 1.0kb downstream 4318 true Chr03: 38938724-38943041 Eucalyptus grandis
Eucgr.C02093 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38938724-38939723 Eucalyptus grandis
Eucgr.C02093 2.0kb upstream 2.0kb upstream 5318 true Chr03: 38939724-38945041 Eucalyptus grandis
Eucgr.C02093 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38943042-38945041 Eucalyptus grandis
Eucgr.C02093 2.0kb downstream 2.0kb downstream 5318 true Chr03: 38937724-38943041 Eucalyptus grandis
Eucgr.C02093 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38937724-38939723 Eucalyptus grandis
Eucgr.C02093 5.0kb upstream 5.0kb upstream 8318 true Chr03: 38939724-38948041 Eucalyptus grandis
Eucgr.C02093 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38943042-38948041 Eucalyptus grandis
Eucgr.C02093 5.0kb downstream 5.0kb downstream 8318 true Chr03: 38934724-38943041 Eucalyptus grandis
Eucgr.C02093 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38934724-38939723 Eucalyptus grandis
Eucgr.C02093 10.0kb upstream 10.0kb upstream 13318 true Chr03: 38939724-38953041 Eucalyptus grandis
Eucgr.C02093 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38943042-38953041 Eucalyptus grandis
Eucgr.C02093 10.0kb downstream 10.0kb downstream 13318 true Chr03: 38929724-38943041 Eucalyptus grandis
Eucgr.C02093 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38929724-38939723 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062385 5270 Rosid View MSA
123748125 5271 Pentapetalae View MSA
122791639 5272 Eudicot View MSA
122043693 5273 Angiosperm View MSA
121347496 5274 Embryophyte View MSA
123424807 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9584 0.0 38.7454    
cufflinks 11.5829 0.0 27.3203   Low
cufflinks 16.3441 0.0 37.496    
cufflinks 17.4452 0.0 39.8591    
cufflinks 12.0361 0.0 28.2766   Low
cufflinks 16.895 0.0 38.5258    

0 Strain