Gene : Eucgr.C00924 E. grandis v2.0
Defline:  (1 of 6) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  762
Name:  ? Eucgr.C00924 Secondary Identifier:  ? PAC:32039153
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-7498 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00924 0.5kb upstream 0.5kb upstream 2019 true Chr03: 14749598-14751616 Eucalyptus grandis
Eucgr.C00924 0.5kb upstream 0.5kb upstream 500 false Chr03: 14749598-14750097 Eucalyptus grandis
Eucgr.C00924 0.5kb downstream 0.5kb downstream 2019 true Chr03: 14750098-14752116 Eucalyptus grandis
Eucgr.C00924 0.5kb downstream 0.5kb downstream 500 false Chr03: 14751617-14752116 Eucalyptus grandis
Eucgr.C00924 1.0kb upstream 1.0kb upstream 2519 true Chr03: 14749098-14751616 Eucalyptus grandis
Eucgr.C00924 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14749098-14750097 Eucalyptus grandis
Eucgr.C00924 1.0kb downstream 1.0kb downstream 2519 true Chr03: 14750098-14752616 Eucalyptus grandis
Eucgr.C00924 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14751617-14752616 Eucalyptus grandis
Eucgr.C00924 2.0kb upstream 2.0kb upstream 3519 true Chr03: 14748098-14751616 Eucalyptus grandis
Eucgr.C00924 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14748098-14750097 Eucalyptus grandis
Eucgr.C00924 2.0kb downstream 2.0kb downstream 3519 true Chr03: 14750098-14753616 Eucalyptus grandis
Eucgr.C00924 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14751617-14753616 Eucalyptus grandis
Eucgr.C00924 5.0kb upstream 5.0kb upstream 6519 true Chr03: 14745098-14751616 Eucalyptus grandis
Eucgr.C00924 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14745098-14750097 Eucalyptus grandis
Eucgr.C00924 5.0kb downstream 5.0kb downstream 6519 true Chr03: 14750098-14756616 Eucalyptus grandis
Eucgr.C00924 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14751617-14756616 Eucalyptus grandis
Eucgr.C00924 10.0kb upstream 10.0kb upstream 11519 true Chr03: 14740098-14751616 Eucalyptus grandis
Eucgr.C00924 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14740098-14750097 Eucalyptus grandis
Eucgr.C00924 10.0kb downstream 10.0kb downstream 11519 true Chr03: 14750098-14761616 Eucalyptus grandis
Eucgr.C00924 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14751617-14761616 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070229 5270 Rosid View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.158641 0.0 0.718379 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain