Gene : Eucgr.B03004 E. grandis v2.0
Defline:  (1 of 1) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  2336
Name:  ? Eucgr.B03004 Secondary Identifier:  ? PAC:32060256
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03004 0.5kb upstream 0.5kb upstream 12005 true Chr02: 50337726-50349730 Eucalyptus grandis
Eucgr.B03004 0.5kb upstream 0.5kb upstream 500 false Chr02: 50337726-50338225 Eucalyptus grandis
Eucgr.B03004 0.5kb downstream 0.5kb downstream 12005 true Chr02: 50338226-50350230 Eucalyptus grandis
Eucgr.B03004 0.5kb downstream 0.5kb downstream 500 false Chr02: 50349731-50350230 Eucalyptus grandis
Eucgr.B03004 1.0kb upstream 1.0kb upstream 12505 true Chr02: 50337226-50349730 Eucalyptus grandis
Eucgr.B03004 1.0kb upstream 1.0kb upstream 1000 false Chr02: 50337226-50338225 Eucalyptus grandis
Eucgr.B03004 1.0kb downstream 1.0kb downstream 12505 true Chr02: 50338226-50350730 Eucalyptus grandis
Eucgr.B03004 1.0kb downstream 1.0kb downstream 1000 false Chr02: 50349731-50350730 Eucalyptus grandis
Eucgr.B03004 2.0kb upstream 2.0kb upstream 13505 true Chr02: 50336226-50349730 Eucalyptus grandis
Eucgr.B03004 2.0kb upstream 2.0kb upstream 2000 false Chr02: 50336226-50338225 Eucalyptus grandis
Eucgr.B03004 2.0kb downstream 2.0kb downstream 13505 true Chr02: 50338226-50351730 Eucalyptus grandis
Eucgr.B03004 2.0kb downstream 2.0kb downstream 2000 false Chr02: 50349731-50351730 Eucalyptus grandis
Eucgr.B03004 5.0kb upstream 5.0kb upstream 16505 true Chr02: 50333226-50349730 Eucalyptus grandis
Eucgr.B03004 5.0kb upstream 5.0kb upstream 5000 false Chr02: 50333226-50338225 Eucalyptus grandis
Eucgr.B03004 5.0kb downstream 5.0kb downstream 16505 true Chr02: 50338226-50354730 Eucalyptus grandis
Eucgr.B03004 5.0kb downstream 5.0kb downstream 5000 false Chr02: 50349731-50354730 Eucalyptus grandis
Eucgr.B03004 10.0kb upstream 10.0kb upstream 21505 true Chr02: 50328226-50349730 Eucalyptus grandis
Eucgr.B03004 10.0kb upstream 10.0kb upstream 10000 false Chr02: 50328226-50338225 Eucalyptus grandis
Eucgr.B03004 10.0kb downstream 10.0kb downstream 21505 true Chr02: 50338226-50359730 Eucalyptus grandis
Eucgr.B03004 10.0kb downstream 10.0kb downstream 10000 false Chr02: 50349731-50359730 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.664 0.0 61.4336    
cufflinks 15.5054 0.0 34.8575    
cufflinks 22.9403 0.0 52.763    
cufflinks 11.2725 0.0 25.3496   Low
cufflinks 10.8746 0.0 24.4619   Low
cufflinks 29.7179 0.0 68.8532   High

0 Strain