Gene : Eucgr.L00011 E. grandis v2.0
Defline:  (1 of 1) PTHR34209:SF1 - RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN Genomic Order:  173
Name:  ? Eucgr.L00011 Secondary Identifier:  ? PAC:32046533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00011 0.5kb upstream 0.5kb upstream 9400 true Chr01: 2980348-2989747 Eucalyptus grandis
Eucgr.L00011 0.5kb upstream 0.5kb upstream 500 false Chr01: 2989248-2989747 Eucalyptus grandis
Eucgr.L00011 0.5kb downstream 0.5kb downstream 9400 true Chr01: 2979848-2989247 Eucalyptus grandis
Eucgr.L00011 0.5kb downstream 0.5kb downstream 500 false Chr01: 2979848-2980347 Eucalyptus grandis
Eucgr.L00011 1.0kb upstream 1.0kb upstream 9900 true Chr01: 2980348-2990247 Eucalyptus grandis
Eucgr.L00011 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2989248-2990247 Eucalyptus grandis
Eucgr.L00011 1.0kb downstream 1.0kb downstream 9900 true Chr01: 2979348-2989247 Eucalyptus grandis
Eucgr.L00011 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2979348-2980347 Eucalyptus grandis
Eucgr.L00011 2.0kb upstream 2.0kb upstream 10900 true Chr01: 2980348-2991247 Eucalyptus grandis
Eucgr.L00011 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2989248-2991247 Eucalyptus grandis
Eucgr.L00011 2.0kb downstream 2.0kb downstream 10900 true Chr01: 2978348-2989247 Eucalyptus grandis
Eucgr.L00011 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2978348-2980347 Eucalyptus grandis
Eucgr.L00011 5.0kb upstream 5.0kb upstream 13900 true Chr01: 2980348-2994247 Eucalyptus grandis
Eucgr.L00011 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2989248-2994247 Eucalyptus grandis
Eucgr.L00011 5.0kb downstream 5.0kb downstream 13900 true Chr01: 2975348-2989247 Eucalyptus grandis
Eucgr.L00011 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2975348-2980347 Eucalyptus grandis
Eucgr.L00011 10.0kb upstream 10.0kb upstream 18900 true Chr01: 2980348-2999247 Eucalyptus grandis
Eucgr.L00011 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2989248-2999247 Eucalyptus grandis
Eucgr.L00011 10.0kb downstream 10.0kb downstream 18900 true Chr01: 2970348-2989247 Eucalyptus grandis
Eucgr.L00011 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2970348-2980347 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044371 5273 Angiosperm View MSA
124063264 5270 Rosid View MSA
123750628 5271 Pentapetalae View MSA
122789779 5272 Eudicot View MSA
121350944 5274 Embryophyte View MSA
123425079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8436 0.0 30.8228    
cufflinks 6.93318 0.0 15.9395    
cufflinks 9.91246 0.0 22.3311    
cufflinks 3.75279 0.0 9.09842   Low
cufflinks 6.27646 0.0 14.5857    
cufflinks 50.1241 0.0 113.054 High High

0 Strain