Gene : Eucgr.A02894 E. grandis v2.0
Defline:  (1 of 1) PTHR11089:SF43 - NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2603
Name:  ? Eucgr.A02894 Secondary Identifier:  ? PAC:32048362
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6845 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02894 0.5kb upstream 0.5kb upstream 6398 true Chr01: 44009889-44016286 Eucalyptus grandis
Eucgr.A02894 0.5kb upstream 0.5kb upstream 500 false Chr01: 44009889-44010388 Eucalyptus grandis
Eucgr.A02894 0.5kb downstream 0.5kb downstream 6398 true Chr01: 44010389-44016786 Eucalyptus grandis
Eucgr.A02894 0.5kb downstream 0.5kb downstream 500 false Chr01: 44016287-44016786 Eucalyptus grandis
Eucgr.A02894 1.0kb upstream 1.0kb upstream 6898 true Chr01: 44009389-44016286 Eucalyptus grandis
Eucgr.A02894 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44009389-44010388 Eucalyptus grandis
Eucgr.A02894 1.0kb downstream 1.0kb downstream 6898 true Chr01: 44010389-44017286 Eucalyptus grandis
Eucgr.A02894 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44016287-44017286 Eucalyptus grandis
Eucgr.A02894 2.0kb upstream 2.0kb upstream 7898 true Chr01: 44008389-44016286 Eucalyptus grandis
Eucgr.A02894 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44008389-44010388 Eucalyptus grandis
Eucgr.A02894 2.0kb downstream 2.0kb downstream 7898 true Chr01: 44010389-44018286 Eucalyptus grandis
Eucgr.A02894 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44016287-44018286 Eucalyptus grandis
Eucgr.A02894 5.0kb upstream 5.0kb upstream 10898 true Chr01: 44005389-44016286 Eucalyptus grandis
Eucgr.A02894 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44005389-44010388 Eucalyptus grandis
Eucgr.A02894 5.0kb downstream 5.0kb downstream 10898 true Chr01: 44010389-44021286 Eucalyptus grandis
Eucgr.A02894 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44016287-44021286 Eucalyptus grandis
Eucgr.A02894 10.0kb upstream 10.0kb upstream 15898 true Chr01: 44000389-44016286 Eucalyptus grandis
Eucgr.A02894 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44000389-44010388 Eucalyptus grandis
Eucgr.A02894 10.0kb downstream 10.0kb downstream 15898 true Chr01: 44010389-44026286 Eucalyptus grandis
Eucgr.A02894 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44016287-44026286 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065366 5270 Rosid View MSA
123739170 5271 Pentapetalae View MSA
122792557 5272 Eudicot View MSA
122045244 5273 Angiosperm View MSA
121346425 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.26516 0.0 10.3744    
cufflinks 1.48425 0.0 3.99218    
cufflinks 3.35197 0.0 8.34501    
cufflinks 1.38145 0.0 3.74408    
cufflinks 1.70787 0.0 4.55237    
cufflinks 16.3809 0.0 36.4121   High

0 Strain