Gene : Eucgr.A02310 E. grandis v2.0
Defline:  (1 of 1) PTHR10799:SF757 - TRANSCRIPTIONAL COREPRESSOR SEUSS Genomic Order:  2073
Name:  ? Eucgr.A02310 Secondary Identifier:  ? PAC:32048182
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02310 0.5kb upstream 0.5kb upstream 15886 true Chr01: 38530542-38546427 Eucalyptus grandis
Eucgr.A02310 0.5kb upstream 0.5kb upstream 500 false Chr01: 38530542-38531041 Eucalyptus grandis
Eucgr.A02310 0.5kb downstream 0.5kb downstream 15886 true Chr01: 38531042-38546927 Eucalyptus grandis
Eucgr.A02310 0.5kb downstream 0.5kb downstream 500 false Chr01: 38546428-38546927 Eucalyptus grandis
Eucgr.A02310 1.0kb upstream 1.0kb upstream 16386 true Chr01: 38530042-38546427 Eucalyptus grandis
Eucgr.A02310 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38530042-38531041 Eucalyptus grandis
Eucgr.A02310 1.0kb downstream 1.0kb downstream 16386 true Chr01: 38531042-38547427 Eucalyptus grandis
Eucgr.A02310 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38546428-38547427 Eucalyptus grandis
Eucgr.A02310 2.0kb upstream 2.0kb upstream 17386 true Chr01: 38529042-38546427 Eucalyptus grandis
Eucgr.A02310 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38529042-38531041 Eucalyptus grandis
Eucgr.A02310 2.0kb downstream 2.0kb downstream 17386 true Chr01: 38531042-38548427 Eucalyptus grandis
Eucgr.A02310 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38546428-38548427 Eucalyptus grandis
Eucgr.A02310 5.0kb upstream 5.0kb upstream 20386 true Chr01: 38526042-38546427 Eucalyptus grandis
Eucgr.A02310 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38526042-38531041 Eucalyptus grandis
Eucgr.A02310 5.0kb downstream 5.0kb downstream 20386 true Chr01: 38531042-38551427 Eucalyptus grandis
Eucgr.A02310 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38546428-38551427 Eucalyptus grandis
Eucgr.A02310 10.0kb upstream 10.0kb upstream 25386 true Chr01: 38521042-38546427 Eucalyptus grandis
Eucgr.A02310 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38521042-38531041 Eucalyptus grandis
Eucgr.A02310 10.0kb downstream 10.0kb downstream 25386 true Chr01: 38531042-38556427 Eucalyptus grandis
Eucgr.A02310 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38546428-38556427 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060619 5270 Rosid View MSA
123749467 5271 Pentapetalae View MSA
122791050 5272 Eudicot View MSA
122043788 5273 Angiosperm View MSA
121344676 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5442 0.0 37.8914    
cufflinks 11.5159 0.0 26.4093    
cufflinks 12.9515 0.0 32.3041    
cufflinks 9.19537 0.0 21.6113   Low
cufflinks 8.82162 0.0 21.8937   Low
cufflinks 12.7118 0.0 30.6616    

0 Strain