Gene : Eucgr.A02413 E. grandis v2.0
Defline:  (1 of 1) PTHR12565:SF112 - TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  2167
Name:  ? Eucgr.A02413 Secondary Identifier:  ? PAC:32046127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02413 0.5kb upstream 0.5kb upstream 5496 true Chr01: 39495853-39501348 Eucalyptus grandis
Eucgr.A02413 0.5kb upstream 0.5kb upstream 500 false Chr01: 39500849-39501348 Eucalyptus grandis
Eucgr.A02413 0.5kb downstream 0.5kb downstream 5496 true Chr01: 39495353-39500848 Eucalyptus grandis
Eucgr.A02413 0.5kb downstream 0.5kb downstream 500 false Chr01: 39495353-39495852 Eucalyptus grandis
Eucgr.A02413 1.0kb upstream 1.0kb upstream 5996 true Chr01: 39495853-39501848 Eucalyptus grandis
Eucgr.A02413 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39500849-39501848 Eucalyptus grandis
Eucgr.A02413 1.0kb downstream 1.0kb downstream 5996 true Chr01: 39494853-39500848 Eucalyptus grandis
Eucgr.A02413 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39494853-39495852 Eucalyptus grandis
Eucgr.A02413 2.0kb upstream 2.0kb upstream 6996 true Chr01: 39495853-39502848 Eucalyptus grandis
Eucgr.A02413 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39500849-39502848 Eucalyptus grandis
Eucgr.A02413 2.0kb downstream 2.0kb downstream 6996 true Chr01: 39493853-39500848 Eucalyptus grandis
Eucgr.A02413 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39493853-39495852 Eucalyptus grandis
Eucgr.A02413 5.0kb upstream 5.0kb upstream 9996 true Chr01: 39495853-39505848 Eucalyptus grandis
Eucgr.A02413 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39500849-39505848 Eucalyptus grandis
Eucgr.A02413 5.0kb downstream 5.0kb downstream 9996 true Chr01: 39490853-39500848 Eucalyptus grandis
Eucgr.A02413 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39490853-39495852 Eucalyptus grandis
Eucgr.A02413 10.0kb upstream 10.0kb upstream 14996 true Chr01: 39495853-39510848 Eucalyptus grandis
Eucgr.A02413 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39500849-39510848 Eucalyptus grandis
Eucgr.A02413 10.0kb downstream 10.0kb downstream 14996 true Chr01: 39485853-39500848 Eucalyptus grandis
Eucgr.A02413 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39485853-39495852 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.6801 0.0 62.1552    
cufflinks 0.932875 0.0 3.34872    
cufflinks 20.255 0.0 52.8912    
cufflinks 1.60103 0.0 4.90976    
cufflinks 0.326285 0.0 1.3502 Low Low
cufflinks 50.5038 0.0 131.331 High High

0 Strain