Gene : Eucgr.A02022 E. grandis v2.0
Defline:  (1 of 3) 1.13.11.27 - 4-hydroxyphenylpyruvate dioxygenase / p-hydroxyphenylpyruvate oxidase Genomic Order:  1817
Name:  ? Eucgr.A02022 Secondary Identifier:  ? PAC:32045808
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1422 Eucalyptus grandis pathologic  
Egrandis PWY-1581 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02022 0.5kb upstream 0.5kb upstream 2853 true Chr01: 35634706-35637558 Eucalyptus grandis
Eucgr.A02022 0.5kb upstream 0.5kb upstream 500 false Chr01: 35637059-35637558 Eucalyptus grandis
Eucgr.A02022 0.5kb downstream 0.5kb downstream 2853 true Chr01: 35634206-35637058 Eucalyptus grandis
Eucgr.A02022 0.5kb downstream 0.5kb downstream 500 false Chr01: 35634206-35634705 Eucalyptus grandis
Eucgr.A02022 1.0kb upstream 1.0kb upstream 3353 true Chr01: 35634706-35638058 Eucalyptus grandis
Eucgr.A02022 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35637059-35638058 Eucalyptus grandis
Eucgr.A02022 1.0kb downstream 1.0kb downstream 3353 true Chr01: 35633706-35637058 Eucalyptus grandis
Eucgr.A02022 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35633706-35634705 Eucalyptus grandis
Eucgr.A02022 2.0kb upstream 2.0kb upstream 4353 true Chr01: 35634706-35639058 Eucalyptus grandis
Eucgr.A02022 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35637059-35639058 Eucalyptus grandis
Eucgr.A02022 2.0kb downstream 2.0kb downstream 4353 true Chr01: 35632706-35637058 Eucalyptus grandis
Eucgr.A02022 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35632706-35634705 Eucalyptus grandis
Eucgr.A02022 5.0kb upstream 5.0kb upstream 7353 true Chr01: 35634706-35642058 Eucalyptus grandis
Eucgr.A02022 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35637059-35642058 Eucalyptus grandis
Eucgr.A02022 5.0kb downstream 5.0kb downstream 7353 true Chr01: 35629706-35637058 Eucalyptus grandis
Eucgr.A02022 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35629706-35634705 Eucalyptus grandis
Eucgr.A02022 10.0kb upstream 10.0kb upstream 12353 true Chr01: 35634706-35647058 Eucalyptus grandis
Eucgr.A02022 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35637059-35647058 Eucalyptus grandis
Eucgr.A02022 10.0kb downstream 10.0kb downstream 12353 true Chr01: 35624706-35637058 Eucalyptus grandis
Eucgr.A02022 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35624706-35634705 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026162 5273 Angiosperm View MSA
124066218 5270 Rosid View MSA
123739234 5271 Pentapetalae View MSA
122787711 5272 Eudicot View MSA
121345001 5274 Embryophyte View MSA
123424419 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 123.284 0.0 288.04 High  
cufflinks 68.2354 0.0 152.927 High  
cufflinks 95.8054 0.0 218.356 High  
cufflinks 30.7093 0.0 67.9735   Low
cufflinks 27.5148 0.0 60.9737   Low
cufflinks 157.95 0.0 380.544 High High

0 Strain