Gene : orange1.1g023374m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12716 - TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT Genomic Order:  58
Name:  ? orange1.1g023374m.g Secondary Identifier:  ? PAC:18130484
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g023374m.g 0.5kb upstream 0.5kb upstream 4177 true scaffold00111: 411355-415531 Citrus sinensis
orange1.1g023374m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00111: 415032-415531 Citrus sinensis
orange1.1g023374m.g 0.5kb downstream 0.5kb downstream 4177 true scaffold00111: 410855-415031 Citrus sinensis
orange1.1g023374m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00111: 410855-411354 Citrus sinensis
orange1.1g023374m.g 1.0kb upstream 1.0kb upstream 4677 true scaffold00111: 411355-416031 Citrus sinensis
orange1.1g023374m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00111: 415032-416031 Citrus sinensis
orange1.1g023374m.g 1.0kb downstream 1.0kb downstream 4677 true scaffold00111: 410355-415031 Citrus sinensis
orange1.1g023374m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00111: 410355-411354 Citrus sinensis
orange1.1g023374m.g 2.0kb upstream 2.0kb upstream 5677 true scaffold00111: 411355-417031 Citrus sinensis
orange1.1g023374m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00111: 415032-417031 Citrus sinensis
orange1.1g023374m.g 2.0kb downstream 2.0kb downstream 5677 true scaffold00111: 409355-415031 Citrus sinensis
orange1.1g023374m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00111: 409355-411354 Citrus sinensis
orange1.1g023374m.g 5.0kb upstream 5.0kb upstream 8677 true scaffold00111: 411355-420031 Citrus sinensis
orange1.1g023374m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00111: 415032-420031 Citrus sinensis
orange1.1g023374m.g 5.0kb downstream 5.0kb downstream 8677 true scaffold00111: 406355-415031 Citrus sinensis
orange1.1g023374m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00111: 406355-411354 Citrus sinensis
orange1.1g023374m.g 10.0kb upstream 10.0kb upstream 13677 true scaffold00111: 411355-425031 Citrus sinensis
orange1.1g023374m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00111: 415032-425031 Citrus sinensis
orange1.1g023374m.g 10.0kb downstream 10.0kb downstream 13677 true scaffold00111: 401355-415031 Citrus sinensis
orange1.1g023374m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00111: 401355-411354 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344508 5266 SBM View MSA
124237584 5268 Malvidae View MSA
124065436 5270 Rosid View MSA
123738263 5271 Pentapetalae View MSA
122787971 5272 Eudicot View MSA
122050405 5273 Angiosperm View MSA
121344556 5274 Embryophyte View MSA
123425649 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain