Gene : orange1.1g009041m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11822:SF5 - ISOCITRATE DEHYDROGENASE [NADP], CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  41
Name:  ? orange1.1g009041m.g Secondary Identifier:  ? PAC:18121171
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6549 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009041m.g 0.5kb upstream 0.5kb upstream 6785 true scaffold00116: 390312-397096 Citrus sinensis
orange1.1g009041m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00116: 390312-390811 Citrus sinensis
orange1.1g009041m.g 0.5kb downstream 0.5kb downstream 6785 true scaffold00116: 390812-397596 Citrus sinensis
orange1.1g009041m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00116: 397097-397596 Citrus sinensis
orange1.1g009041m.g 1.0kb upstream 1.0kb upstream 7285 true scaffold00116: 389812-397096 Citrus sinensis
orange1.1g009041m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00116: 389812-390811 Citrus sinensis
orange1.1g009041m.g 1.0kb downstream 1.0kb downstream 7285 true scaffold00116: 390812-398096 Citrus sinensis
orange1.1g009041m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00116: 397097-398096 Citrus sinensis
orange1.1g009041m.g 2.0kb upstream 2.0kb upstream 8285 true scaffold00116: 388812-397096 Citrus sinensis
orange1.1g009041m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00116: 388812-390811 Citrus sinensis
orange1.1g009041m.g 2.0kb downstream 2.0kb downstream 8285 true scaffold00116: 390812-399096 Citrus sinensis
orange1.1g009041m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00116: 397097-399096 Citrus sinensis
orange1.1g009041m.g 5.0kb upstream 5.0kb upstream 11285 true scaffold00116: 385812-397096 Citrus sinensis
orange1.1g009041m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00116: 385812-390811 Citrus sinensis
orange1.1g009041m.g 5.0kb downstream 5.0kb downstream 11285 true scaffold00116: 390812-402096 Citrus sinensis
orange1.1g009041m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00116: 397097-402096 Citrus sinensis
orange1.1g009041m.g 10.0kb upstream 10.0kb upstream 16285 true scaffold00116: 380812-397096 Citrus sinensis
orange1.1g009041m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00116: 380812-390811 Citrus sinensis
orange1.1g009041m.g 10.0kb downstream 10.0kb downstream 16285 true scaffold00116: 390812-407096 Citrus sinensis
orange1.1g009041m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00116: 397097-407096 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041513 5273 Angiosperm View MSA
124338965 5266 SBM View MSA
124253580 5268 Malvidae View MSA
124066348 5270 Rosid View MSA
123740516 5271 Pentapetalae View MSA
122791819 5272 Eudicot View MSA
121349846 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain