Gene : orange1.1g002417m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11771:SF60 - LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  91
Name:  ? orange1.1g002417m.g Secondary Identifier:  ? PAC:18101537
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5409 Citrus sinensis pathologic  
Csinensis PWY-5410 Citrus sinensis pathologic  
Csinensis PWY-735 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g002417m.g 0.5kb upstream 0.5kb upstream 5704 true scaffold00003: 702577-708280 Citrus sinensis
orange1.1g002417m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00003: 702577-703076 Citrus sinensis
orange1.1g002417m.g 0.5kb downstream 0.5kb downstream 5704 true scaffold00003: 703077-708780 Citrus sinensis
orange1.1g002417m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00003: 708281-708780 Citrus sinensis
orange1.1g002417m.g 1.0kb upstream 1.0kb upstream 6204 true scaffold00003: 702077-708280 Citrus sinensis
orange1.1g002417m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00003: 702077-703076 Citrus sinensis
orange1.1g002417m.g 1.0kb downstream 1.0kb downstream 6204 true scaffold00003: 703077-709280 Citrus sinensis
orange1.1g002417m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00003: 708281-709280 Citrus sinensis
orange1.1g002417m.g 2.0kb upstream 2.0kb upstream 7204 true scaffold00003: 701077-708280 Citrus sinensis
orange1.1g002417m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00003: 701077-703076 Citrus sinensis
orange1.1g002417m.g 2.0kb downstream 2.0kb downstream 7204 true scaffold00003: 703077-710280 Citrus sinensis
orange1.1g002417m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00003: 708281-710280 Citrus sinensis
orange1.1g002417m.g 5.0kb upstream 5.0kb upstream 10204 true scaffold00003: 698077-708280 Citrus sinensis
orange1.1g002417m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00003: 698077-703076 Citrus sinensis
orange1.1g002417m.g 5.0kb downstream 5.0kb downstream 10204 true scaffold00003: 703077-713280 Citrus sinensis
orange1.1g002417m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00003: 708281-713280 Citrus sinensis
orange1.1g002417m.g 10.0kb upstream 10.0kb upstream 15204 true scaffold00003: 693077-708280 Citrus sinensis
orange1.1g002417m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00003: 693077-703076 Citrus sinensis
orange1.1g002417m.g 10.0kb downstream 10.0kb downstream 15204 true scaffold00003: 703077-718280 Citrus sinensis
orange1.1g002417m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00003: 708281-718280 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340250 5266 SBM View MSA
124236928 5268 Malvidae View MSA
124068489 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain