Gene : orange1.1g013845m.g C. sinensis v1.1
Defline:  (1 of 13) 2.5.1.116 - Homogentisate geranylgeranyltransferase / HGGT Genomic Order:  18
Name:  ? orange1.1g013845m.g Secondary Identifier:  ? PAC:18101311
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1422 Citrus sinensis pathologic  
Csinensis PWY-7436 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g013845m.g 0.5kb upstream 0.5kb upstream 7305 true scaffold00327: 151375-158679 Citrus sinensis
orange1.1g013845m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00327: 158180-158679 Citrus sinensis
orange1.1g013845m.g 0.5kb downstream 0.5kb downstream 7305 true scaffold00327: 150875-158179 Citrus sinensis
orange1.1g013845m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00327: 150875-151374 Citrus sinensis
orange1.1g013845m.g 1.0kb upstream 1.0kb upstream 7805 true scaffold00327: 151375-159179 Citrus sinensis
orange1.1g013845m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00327: 158180-159179 Citrus sinensis
orange1.1g013845m.g 1.0kb downstream 1.0kb downstream 7805 true scaffold00327: 150375-158179 Citrus sinensis
orange1.1g013845m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00327: 150375-151374 Citrus sinensis
orange1.1g013845m.g 2.0kb upstream 2.0kb upstream 8805 true scaffold00327: 151375-160179 Citrus sinensis
orange1.1g013845m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00327: 158180-160179 Citrus sinensis
orange1.1g013845m.g 2.0kb downstream 2.0kb downstream 8805 true scaffold00327: 149375-158179 Citrus sinensis
orange1.1g013845m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00327: 149375-151374 Citrus sinensis
orange1.1g013845m.g 5.0kb upstream 5.0kb upstream 11805 true scaffold00327: 151375-163179 Citrus sinensis
orange1.1g013845m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00327: 158180-163179 Citrus sinensis
orange1.1g013845m.g 5.0kb downstream 5.0kb downstream 11805 true scaffold00327: 146375-158179 Citrus sinensis
orange1.1g013845m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00327: 146375-151374 Citrus sinensis
orange1.1g013845m.g 10.0kb upstream 10.0kb upstream 16805 true scaffold00327: 151375-168179 Citrus sinensis
orange1.1g013845m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00327: 158180-168179 Citrus sinensis
orange1.1g013845m.g 10.0kb downstream 10.0kb downstream 16805 true scaffold00327: 141375-158179 Citrus sinensis
orange1.1g013845m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00327: 141375-151374 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121535152 5273 Angiosperm View MSA
124335848 5266 SBM View MSA
124180465 5268 Malvidae View MSA
123902710 5270 Rosid View MSA
123484423 5271 Pentapetalae View MSA
122519656 5272 Eudicot View MSA
120807914 5274 Embryophyte View MSA
122849467 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain