Gene : orange1.1g022332m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR30373:SF2 - UPF0603 PROTEIN YGCG Genomic Order:  8
Name:  ? orange1.1g022332m.g Secondary Identifier:  ? PAC:18115979
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5083 Citrus sinensis pathologic  
Csinensis PWY-6348 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g022332m.g 0.5kb upstream 0.5kb upstream 2682 true scaffold00407: 48419-51100 Citrus sinensis
orange1.1g022332m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00407: 50601-51100 Citrus sinensis
orange1.1g022332m.g 0.5kb downstream 0.5kb downstream 2682 true scaffold00407: 47919-50600 Citrus sinensis
orange1.1g022332m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00407: 47919-48418 Citrus sinensis
orange1.1g022332m.g 1.0kb upstream 1.0kb upstream 3182 true scaffold00407: 48419-51600 Citrus sinensis
orange1.1g022332m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00407: 50601-51600 Citrus sinensis
orange1.1g022332m.g 1.0kb downstream 1.0kb downstream 3182 true scaffold00407: 47419-50600 Citrus sinensis
orange1.1g022332m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00407: 47419-48418 Citrus sinensis
orange1.1g022332m.g 2.0kb upstream 2.0kb upstream 4182 true scaffold00407: 48419-52600 Citrus sinensis
orange1.1g022332m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00407: 50601-52600 Citrus sinensis
orange1.1g022332m.g 2.0kb downstream 2.0kb downstream 4182 true scaffold00407: 46419-50600 Citrus sinensis
orange1.1g022332m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00407: 46419-48418 Citrus sinensis
orange1.1g022332m.g 5.0kb upstream 5.0kb upstream 7182 true scaffold00407: 48419-55600 Citrus sinensis
orange1.1g022332m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00407: 50601-55600 Citrus sinensis
orange1.1g022332m.g 5.0kb downstream 5.0kb downstream 7182 true scaffold00407: 43419-50600 Citrus sinensis
orange1.1g022332m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00407: 43419-48418 Citrus sinensis
orange1.1g022332m.g 10.0kb upstream 10.0kb upstream 12182 true scaffold00407: 48419-60600 Citrus sinensis
orange1.1g022332m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00407: 50601-60600 Citrus sinensis
orange1.1g022332m.g 10.0kb downstream 10.0kb downstream 12182 true scaffold00407: 38419-50600 Citrus sinensis
orange1.1g022332m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00407: 38419-48418 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342350 5266 SBM View MSA
124243217 5268 Malvidae View MSA
124061871 5270 Rosid View MSA
123737495 5271 Pentapetalae View MSA
122787639 5272 Eudicot View MSA
122046154 5273 Angiosperm View MSA
121349050 5274 Embryophyte View MSA
123424307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain