Gene : orange1.1g015440m.g C. sinensis v1.1
Defline:  (1 of 2) KOG3471 - RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2 Genomic Order:  2
Name:  ? orange1.1g015440m.g Secondary Identifier:  ? PAC:18104985
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g015440m.g 0.5kb upstream 0.5kb upstream 9312 true scaffold00196: 39590-48901 Citrus sinensis
orange1.1g015440m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00196: 48402-48901 Citrus sinensis
orange1.1g015440m.g 0.5kb downstream 0.5kb downstream 9312 true scaffold00196: 39090-48401 Citrus sinensis
orange1.1g015440m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00196: 39090-39589 Citrus sinensis
orange1.1g015440m.g 1.0kb upstream 1.0kb upstream 9812 true scaffold00196: 39590-49401 Citrus sinensis
orange1.1g015440m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00196: 48402-49401 Citrus sinensis
orange1.1g015440m.g 1.0kb downstream 1.0kb downstream 9812 true scaffold00196: 38590-48401 Citrus sinensis
orange1.1g015440m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00196: 38590-39589 Citrus sinensis
orange1.1g015440m.g 2.0kb upstream 2.0kb upstream 10812 true scaffold00196: 39590-50401 Citrus sinensis
orange1.1g015440m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00196: 48402-50401 Citrus sinensis
orange1.1g015440m.g 2.0kb downstream 2.0kb downstream 10812 true scaffold00196: 37590-48401 Citrus sinensis
orange1.1g015440m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00196: 37590-39589 Citrus sinensis
orange1.1g015440m.g 5.0kb upstream 5.0kb upstream 13812 true scaffold00196: 39590-53401 Citrus sinensis
orange1.1g015440m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00196: 48402-53401 Citrus sinensis
orange1.1g015440m.g 5.0kb downstream 5.0kb downstream 13812 true scaffold00196: 34590-48401 Citrus sinensis
orange1.1g015440m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00196: 34590-39589 Citrus sinensis
orange1.1g015440m.g 10.0kb upstream 10.0kb upstream 18812 true scaffold00196: 39590-58401 Citrus sinensis
orange1.1g015440m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00196: 48402-58401 Citrus sinensis
orange1.1g015440m.g 10.0kb downstream 10.0kb downstream 18812 true scaffold00196: 29590-48401 Citrus sinensis
orange1.1g015440m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00196: 29590-39589 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121530111 5273 Angiosperm Singleton cluster - no MSA
124329712 5266 SBM Singleton cluster - no MSA
124174965 5268 Malvidae Singleton cluster - no MSA
123897500 5270 Rosid Singleton cluster - no MSA
123479359 5271 Pentapetalae Singleton cluster - no MSA
122514611 5272 Eudicot Singleton cluster - no MSA
120802873 5274 Embryophyte Singleton cluster - no MSA
122844427 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain