Gene : orange1.1g011392m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Genomic Order:  20
Name:  ? orange1.1g011392m.g Secondary Identifier:  ? PAC:18097926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g011392m.g 0.5kb upstream 0.5kb upstream 4673 true scaffold00145: 244742-249414 Citrus sinensis
orange1.1g011392m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00145: 244742-245241 Citrus sinensis
orange1.1g011392m.g 0.5kb downstream 0.5kb downstream 4673 true scaffold00145: 245242-249914 Citrus sinensis
orange1.1g011392m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00145: 249415-249914 Citrus sinensis
orange1.1g011392m.g 1.0kb upstream 1.0kb upstream 5173 true scaffold00145: 244242-249414 Citrus sinensis
orange1.1g011392m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00145: 244242-245241 Citrus sinensis
orange1.1g011392m.g 1.0kb downstream 1.0kb downstream 5173 true scaffold00145: 245242-250414 Citrus sinensis
orange1.1g011392m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00145: 249415-250414 Citrus sinensis
orange1.1g011392m.g 2.0kb upstream 2.0kb upstream 6173 true scaffold00145: 243242-249414 Citrus sinensis
orange1.1g011392m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00145: 243242-245241 Citrus sinensis
orange1.1g011392m.g 2.0kb downstream 2.0kb downstream 6173 true scaffold00145: 245242-251414 Citrus sinensis
orange1.1g011392m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00145: 249415-251414 Citrus sinensis
orange1.1g011392m.g 5.0kb upstream 5.0kb upstream 9173 true scaffold00145: 240242-249414 Citrus sinensis
orange1.1g011392m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00145: 240242-245241 Citrus sinensis
orange1.1g011392m.g 5.0kb downstream 5.0kb downstream 9173 true scaffold00145: 245242-254414 Citrus sinensis
orange1.1g011392m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00145: 249415-254414 Citrus sinensis
orange1.1g011392m.g 10.0kb upstream 10.0kb upstream 14173 true scaffold00145: 235242-249414 Citrus sinensis
orange1.1g011392m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00145: 235242-245241 Citrus sinensis
orange1.1g011392m.g 10.0kb downstream 10.0kb downstream 14173 true scaffold00145: 245242-259414 Citrus sinensis
orange1.1g011392m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00145: 249415-259414 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345069 5266 SBM View MSA
124237626 5268 Malvidae View MSA
124074044 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain