Gene : orange1.1g047998m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED Genomic Order:  8
Name:  ? orange1.1g047998m.g Secondary Identifier:  ? PAC:18125422
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g047998m.g 0.5kb upstream 0.5kb upstream 4869 true scaffold00097: 46427-51295 Citrus sinensis
orange1.1g047998m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00097: 46427-46926 Citrus sinensis
orange1.1g047998m.g 0.5kb downstream 0.5kb downstream 4869 true scaffold00097: 46927-51795 Citrus sinensis
orange1.1g047998m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00097: 51296-51795 Citrus sinensis
orange1.1g047998m.g 1.0kb upstream 1.0kb upstream 5369 true scaffold00097: 45927-51295 Citrus sinensis
orange1.1g047998m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00097: 45927-46926 Citrus sinensis
orange1.1g047998m.g 1.0kb downstream 1.0kb downstream 5369 true scaffold00097: 46927-52295 Citrus sinensis
orange1.1g047998m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00097: 51296-52295 Citrus sinensis
orange1.1g047998m.g 2.0kb upstream 2.0kb upstream 6369 true scaffold00097: 44927-51295 Citrus sinensis
orange1.1g047998m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00097: 44927-46926 Citrus sinensis
orange1.1g047998m.g 2.0kb downstream 2.0kb downstream 6369 true scaffold00097: 46927-53295 Citrus sinensis
orange1.1g047998m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00097: 51296-53295 Citrus sinensis
orange1.1g047998m.g 5.0kb upstream 5.0kb upstream 9369 true scaffold00097: 41927-51295 Citrus sinensis
orange1.1g047998m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00097: 41927-46926 Citrus sinensis
orange1.1g047998m.g 5.0kb downstream 5.0kb downstream 9369 true scaffold00097: 46927-56295 Citrus sinensis
orange1.1g047998m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00097: 51296-56295 Citrus sinensis
orange1.1g047998m.g 10.0kb upstream 10.0kb upstream 14369 true scaffold00097: 36927-51295 Citrus sinensis
orange1.1g047998m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00097: 36927-46926 Citrus sinensis
orange1.1g047998m.g 10.0kb downstream 10.0kb downstream 14369 true scaffold00097: 46927-61295 Citrus sinensis
orange1.1g047998m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00097: 51296-61295 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344312 5266 SBM View MSA
124238482 5268 Malvidae View MSA
124067863 5270 Rosid View MSA
123737640 5271 Pentapetalae View MSA
122793581 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain