Gene : orange1.1g022057m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR20836:SF2 - 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE 3, CHLOROPLASTIC-RELATED Genomic Order:  48
Name:  ? orange1.1g022057m.g Secondary Identifier:  ? PAC:18101157
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5097 Citrus sinensis pathologic  
Csinensis PWY-724 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g022057m.g 0.5kb upstream 0.5kb upstream 3926 true scaffold00062: 320125-324050 Citrus sinensis
orange1.1g022057m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00062: 323551-324050 Citrus sinensis
orange1.1g022057m.g 0.5kb downstream 0.5kb downstream 3926 true scaffold00062: 319625-323550 Citrus sinensis
orange1.1g022057m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00062: 319625-320124 Citrus sinensis
orange1.1g022057m.g 1.0kb upstream 1.0kb upstream 4426 true scaffold00062: 320125-324550 Citrus sinensis
orange1.1g022057m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00062: 323551-324550 Citrus sinensis
orange1.1g022057m.g 1.0kb downstream 1.0kb downstream 4426 true scaffold00062: 319125-323550 Citrus sinensis
orange1.1g022057m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00062: 319125-320124 Citrus sinensis
orange1.1g022057m.g 2.0kb upstream 2.0kb upstream 5426 true scaffold00062: 320125-325550 Citrus sinensis
orange1.1g022057m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00062: 323551-325550 Citrus sinensis
orange1.1g022057m.g 2.0kb downstream 2.0kb downstream 5426 true scaffold00062: 318125-323550 Citrus sinensis
orange1.1g022057m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00062: 318125-320124 Citrus sinensis
orange1.1g022057m.g 5.0kb upstream 5.0kb upstream 8426 true scaffold00062: 320125-328550 Citrus sinensis
orange1.1g022057m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00062: 323551-328550 Citrus sinensis
orange1.1g022057m.g 5.0kb downstream 5.0kb downstream 8426 true scaffold00062: 315125-323550 Citrus sinensis
orange1.1g022057m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00062: 315125-320124 Citrus sinensis
orange1.1g022057m.g 10.0kb upstream 10.0kb upstream 13426 true scaffold00062: 320125-333550 Citrus sinensis
orange1.1g022057m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00062: 323551-333550 Citrus sinensis
orange1.1g022057m.g 10.0kb downstream 10.0kb downstream 13426 true scaffold00062: 310125-323550 Citrus sinensis
orange1.1g022057m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00062: 310125-320124 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342546 5266 SBM View MSA
124237617 5268 Malvidae View MSA
124065069 5270 Rosid View MSA
123739710 5271 Pentapetalae View MSA
122786759 5272 Eudicot View MSA
122042958 5273 Angiosperm View MSA
121344567 5274 Embryophyte View MSA
123380066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain