Gene : orange1.1g009323m.g C. sinensis v1.1
Defline:  (1 of 1) PF00289//PF02785//PF13535 - Carbamoyl-phosphate synthase L chain, N-terminal domain (CPSase_L_chain) // Biotin carboxylase C-terminal domain (Biotin_carb_C) // ATP-grasp domain (ATP-grasp_4) Genomic Order:  91
Name:  ? orange1.1g009323m.g Secondary Identifier:  ? PAC:18105352
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY0-1264 Citrus sinensis pathologic  
Csinensis PWY-4381 Citrus sinensis pathologic  
Csinensis PWY-5156 Citrus sinensis pathologic  
Csinensis PWY-7388 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009323m.g 0.5kb upstream 0.5kb upstream 8209 true scaffold00050: 667601-675809 Citrus sinensis
orange1.1g009323m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00050: 667601-668100 Citrus sinensis
orange1.1g009323m.g 0.5kb downstream 0.5kb downstream 8209 true scaffold00050: 668101-676309 Citrus sinensis
orange1.1g009323m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00050: 675810-676309 Citrus sinensis
orange1.1g009323m.g 1.0kb upstream 1.0kb upstream 8709 true scaffold00050: 667101-675809 Citrus sinensis
orange1.1g009323m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00050: 667101-668100 Citrus sinensis
orange1.1g009323m.g 1.0kb downstream 1.0kb downstream 8709 true scaffold00050: 668101-676809 Citrus sinensis
orange1.1g009323m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00050: 675810-676809 Citrus sinensis
orange1.1g009323m.g 2.0kb upstream 2.0kb upstream 9709 true scaffold00050: 666101-675809 Citrus sinensis
orange1.1g009323m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00050: 666101-668100 Citrus sinensis
orange1.1g009323m.g 2.0kb downstream 2.0kb downstream 9709 true scaffold00050: 668101-677809 Citrus sinensis
orange1.1g009323m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00050: 675810-677809 Citrus sinensis
orange1.1g009323m.g 5.0kb upstream 5.0kb upstream 12709 true scaffold00050: 663101-675809 Citrus sinensis
orange1.1g009323m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00050: 663101-668100 Citrus sinensis
orange1.1g009323m.g 5.0kb downstream 5.0kb downstream 12709 true scaffold00050: 668101-680809 Citrus sinensis
orange1.1g009323m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00050: 675810-680809 Citrus sinensis
orange1.1g009323m.g 10.0kb upstream 10.0kb upstream 17709 true scaffold00050: 658101-675809 Citrus sinensis
orange1.1g009323m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00050: 658101-668100 Citrus sinensis
orange1.1g009323m.g 10.0kb downstream 10.0kb downstream 17709 true scaffold00050: 668101-685809 Citrus sinensis
orange1.1g009323m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00050: 675810-685809 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124347013 5266 SBM View MSA
124253472 5268 Malvidae View MSA
124069238 5270 Rosid View MSA
123745684 5271 Pentapetalae View MSA
122794668 5272 Eudicot View MSA
122048347 5273 Angiosperm View MSA
121348356 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain