Gene : orange1.1g007151m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE Genomic Order:  241
Name:  ? orange1.1g007151m.g Secondary Identifier:  ? PAC:18106025
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis ARO-PWY Citrus sinensis pathologic  
Csinensis PWY-6163 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g007151m.g 0.5kb upstream 0.5kb upstream 6611 true scaffold00011: 1890645-1897255 Citrus sinensis
orange1.1g007151m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00011: 1896756-1897255 Citrus sinensis
orange1.1g007151m.g 0.5kb downstream 0.5kb downstream 6611 true scaffold00011: 1890145-1896755 Citrus sinensis
orange1.1g007151m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00011: 1890145-1890644 Citrus sinensis
orange1.1g007151m.g 1.0kb upstream 1.0kb upstream 7111 true scaffold00011: 1890645-1897755 Citrus sinensis
orange1.1g007151m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00011: 1896756-1897755 Citrus sinensis
orange1.1g007151m.g 1.0kb downstream 1.0kb downstream 7111 true scaffold00011: 1889645-1896755 Citrus sinensis
orange1.1g007151m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00011: 1889645-1890644 Citrus sinensis
orange1.1g007151m.g 2.0kb upstream 2.0kb upstream 8111 true scaffold00011: 1890645-1898755 Citrus sinensis
orange1.1g007151m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00011: 1896756-1898755 Citrus sinensis
orange1.1g007151m.g 2.0kb downstream 2.0kb downstream 8111 true scaffold00011: 1888645-1896755 Citrus sinensis
orange1.1g007151m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00011: 1888645-1890644 Citrus sinensis
orange1.1g007151m.g 5.0kb upstream 5.0kb upstream 11111 true scaffold00011: 1890645-1901755 Citrus sinensis
orange1.1g007151m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00011: 1896756-1901755 Citrus sinensis
orange1.1g007151m.g 5.0kb downstream 5.0kb downstream 11111 true scaffold00011: 1885645-1896755 Citrus sinensis
orange1.1g007151m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00011: 1885645-1890644 Citrus sinensis
orange1.1g007151m.g 10.0kb upstream 10.0kb upstream 16111 true scaffold00011: 1890645-1906755 Citrus sinensis
orange1.1g007151m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00011: 1896756-1906755 Citrus sinensis
orange1.1g007151m.g 10.0kb downstream 10.0kb downstream 16111 true scaffold00011: 1880645-1896755 Citrus sinensis
orange1.1g007151m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00011: 1880645-1890644 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341830 5266 SBM View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain