Gene : 116848 S. moellendorffii v1.0
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  79
Name:  ? 116848 Secondary Identifier:  ? PAC:15405711
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii TRNA-CHARGING-PWY Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
116848 0.5kb upstream 0.5kb upstream 3825 true scaffold_54: 1306615-1310439 Selaginella moellendorffii
116848 0.5kb upstream 0.5kb upstream 500 false scaffold_54: 1309940-1310439 Selaginella moellendorffii
116848 0.5kb downstream 0.5kb downstream 3825 true scaffold_54: 1306115-1309939 Selaginella moellendorffii
116848 0.5kb downstream 0.5kb downstream 500 false scaffold_54: 1306115-1306614 Selaginella moellendorffii
116848 1.0kb upstream 1.0kb upstream 4325 true scaffold_54: 1306615-1310939 Selaginella moellendorffii
116848 1.0kb upstream 1.0kb upstream 1000 false scaffold_54: 1309940-1310939 Selaginella moellendorffii
116848 1.0kb downstream 1.0kb downstream 4325 true scaffold_54: 1305615-1309939 Selaginella moellendorffii
116848 1.0kb downstream 1.0kb downstream 1000 false scaffold_54: 1305615-1306614 Selaginella moellendorffii
116848 2.0kb upstream 2.0kb upstream 5325 true scaffold_54: 1306615-1311939 Selaginella moellendorffii
116848 2.0kb upstream 2.0kb upstream 2000 false scaffold_54: 1309940-1311939 Selaginella moellendorffii
116848 2.0kb downstream 2.0kb downstream 5325 true scaffold_54: 1304615-1309939 Selaginella moellendorffii
116848 2.0kb downstream 2.0kb downstream 2000 false scaffold_54: 1304615-1306614 Selaginella moellendorffii
116848 5.0kb upstream 5.0kb upstream 8325 true scaffold_54: 1306615-1314939 Selaginella moellendorffii
116848 5.0kb upstream 5.0kb upstream 5000 false scaffold_54: 1309940-1314939 Selaginella moellendorffii
116848 5.0kb downstream 5.0kb downstream 8325 true scaffold_54: 1301615-1309939 Selaginella moellendorffii
116848 5.0kb downstream 5.0kb downstream 5000 false scaffold_54: 1301615-1306614 Selaginella moellendorffii
116848 10.0kb upstream 10.0kb upstream 13325 true scaffold_54: 1306615-1319939 Selaginella moellendorffii
116848 10.0kb upstream 10.0kb upstream 10000 false scaffold_54: 1309940-1319939 Selaginella moellendorffii
116848 10.0kb downstream 10.0kb downstream 13325 true scaffold_54: 1296615-1309939 Selaginella moellendorffii
116848 10.0kb downstream 10.0kb downstream 10000 false scaffold_54: 1296615-1306614 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain