Protein Family : RING/U-box superfamily protein 123428794

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  405

404 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29851.t000050 (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED R. communis v0.1 2409   29851: 290562-292970
29897.t000008 (1 of 1) PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 R. communis v0.1 798   29897: 211823-212620
29983.t000100 (1 of 1) PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED R. communis v0.1 3396   29983: 585959-589354
30170.t000400 (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED R. communis v0.1 1514   30170: 2166621-2168134
29250.t000003 (1 of 1) PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED R. communis v0.1 1369   29250: 16825-18193
Cucsa.046190 (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 C. sativus v1.0 3030   scaffold00542: 1769880-1772909
Cucsa.101760 (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED C. sativus v1.0 1304   scaffold00927: 958029-959332
Cucsa.123210 (1 of 1) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 C. sativus v1.0 2525   scaffold01000: 488908-491432
Cucsa.147700 (1 of 2) PTHR12313//PTHR12313:SF5 - RNF5 C. sativus v1.0 2394   scaffold01107: 109628-112021
Cucsa.232420 (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 C. sativus v1.0 1390   scaffold01989: 391940-393329
orange1.1g027504m.g (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED C. sinensis v1.1 1355   scaffold00006: 2394852-2396206
orange1.1g026346m.g (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 C. sinensis v1.1 3285   scaffold00010: 2126356-2129640
orange1.1g024938m.g (1 of 1) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 C. sinensis v1.1 2889   scaffold00012: 84854-87742
orange1.1g027010m.g (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 C. sinensis v1.1 1559   scaffold00002: 2680605-2682163
AT4G03510 (1 of 6) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) A. thaliana TAIR10 RMA1 2309   Chr4: 1557120-1559428
AT4G28270 (1 of 6) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) A. thaliana TAIR10 RMA2 1481   Chr4: 14007539-14009019
AT4G27470 (1 of 1) PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 A. thaliana TAIR10 RMA3 1520   Chr4: 13734999-13736518
AT1G19310 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED A. thaliana TAIR10 1440   Chr1: 6676234-6677673
AT2G23780 (1 of 1) PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED A. thaliana TAIR10 1331   Chr2: 10123306-10124636
Thhalv10026108m.g (1 of 2) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 E. salsugineum v1.0 1820   scaffold_1: 5394989-5396808
Thhalv10026313m.g (1 of 4) PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED E. salsugineum v1.0 1601   scaffold_1: 5105458-5107058
Thhalv10000313m.g (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED E. salsugineum v1.0 1328   scaffold_15: 2256201-2257528
Thhalv10014518m.g (1 of 2) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 E. salsugineum v1.0 1786   scaffold_2: 11514038-11515823
Thhalv10028914m.g (1 of 4) PTHR12313:SF14 - E3 UBIQUITIN-PROTEIN LIGASE RMA1-RELATED E. salsugineum v1.0 1855   scaffold_3: 1778214-1780068
Thhalv10008430m.g (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 E. salsugineum v1.0 1551   scaffold_5: 8855253-8856803
Ciclev10002367m.g (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 C. clementina v1.0 1641   scaffold_5: 40735856-40737496
Ciclev10026329m.g (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED C. clementina v1.0 3758   scaffold_7: 2432146-2435903
Ciclev10009229m.g (1 of 1) PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 C. clementina v1.0 2927   scaffold_1: 17879966-17882892
Ciclev10016469m.g (1 of 1) PTHR12313//PTHR12313:SF6 - RNF5 C. clementina v1.0 3346   scaffold_2: 33369934-33373279
Lus10018589.g (1 of 3) PTHR12313//PTHR12313:SF5 - RNF5 L. usitatissimum v1.0 645   scaffold1308: 463561-464205

405 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30170.m013988 R. communis v0.1 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
29983.m003201 R. communis v0.1 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
29897.m000362 R. communis v0.1 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
29851.m002408 R. communis v0.1 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
29250.m000232 R. communis v0.1 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
Cucsa.147700.1 C. sativus v1.0 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
Cucsa.101760.1 C. sativus v1.0 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
Cucsa.046190.1 C. sativus v1.0 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
Cucsa.232420.1 C. sativus v1.0 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
Cucsa.123210.1 C. sativus v1.0 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
orange1.1g026346m C. sinensis v1.1 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
orange1.1g027504m C. sinensis v1.1 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
orange1.1g024938m C. sinensis v1.1 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
orange1.1g027010m C. sinensis v1.1 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
AT4G28270.1 A. thaliana TAIR10 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
AT2G23780.1 A. thaliana TAIR10 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
AT1G19310.1 A. thaliana TAIR10 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
AT4G27470.1 A. thaliana TAIR10 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
AT4G03510.1 A. thaliana TAIR10 123428794 RING/U-box superfamily protein 5 5275 Viridiplantae
Thhalv10028914m E. salsugineum v1.0 123428794 RING/U-box superfamily protein 6 5275 Viridiplantae
Thhalv10008430m E. salsugineum v1.0 123428794 RING/U-box superfamily protein 6 5275 Viridiplantae
Thhalv10026108m E. salsugineum v1.0 123428794 RING/U-box superfamily protein 6 5275 Viridiplantae
Thhalv10000313m E. salsugineum v1.0 123428794 RING/U-box superfamily protein 6 5275 Viridiplantae
Thhalv10014518m E. salsugineum v1.0 123428794 RING/U-box superfamily protein 6 5275 Viridiplantae
Thhalv10026313m E. salsugineum v1.0 123428794 RING/U-box superfamily protein 6 5275 Viridiplantae
Ciclev10002367m C. clementina v1.0 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
Ciclev10009229m C. clementina v1.0 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
Ciclev10016469m C. clementina v1.0 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
Ciclev10026329m C. clementina v1.0 123428794 RING/U-box superfamily protein 4 5275 Viridiplantae
Lus10016796 L. usitatissimum v1.0 123428794 RING/U-box superfamily protein 9 5275 Viridiplantae