Protein Family : U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 123428477

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  92

92 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29801.t000027 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) R. communis v0.1 6416   29801: 173978-180393
Cucsa.252390 (1 of 1) PF00270//PF00271//PF02889//PF04851 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) // Type III restriction enzyme, res subunit (ResIII) C. sativus v1.0 8750   scaffold02229: 1298967-1307716
orange1.1g000114m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. sinensis v1.1 8553   scaffold00299: 12022-20574
AT1G20960 (1 of 2) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) A. thaliana TAIR10 emb1507 8503   Chr1: 7301748-7310250
Thhalv10016123m.g (1 of 1) PF00270//PF00271//PF02889//PF04851 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) // Type III restriction enzyme, res subunit (ResIII) E. salsugineum v1.0 6689   scaffold_10: 11528723-11535411
Thhalv10006525m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) E. salsugineum v1.0 7742   scaffold_5: 8238732-8246473
Ciclev10010890m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. clementina v1.0 8031   scaffold_6: 7580996-7589026
Ciclev10004124m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. clementina v1.0 8126   scaffold_9: 29008034-29016159
Lus10016048.g (1 of 6) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) L. usitatissimum v1.0 6966   scaffold172: 411198-418163
Lus10025168.g (1 of 6) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) L. usitatissimum v1.0 6180   scaffold305: 622980-629159
Gorai.011G217300 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) G. raimondii v2.1 7863   Chr11: 52330942-52338804
estExt_Genemark1.C_50308 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. subellipsoidea C-169 v2.0 13813   scaffold_5: 1563891-1577703
estExt_Genewise1Plus.C_10_t20113 (1 of 2) PTHR24075:SF0 - TRANSLOCATION PROTEIN SEC63 HOMOLOG M. pusilla CCMP1545 v3.0 6817   scaffold_10: 792702-799518
fgenesh2_pm.C_Chr_12000052 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. sp RCC299 v3.0 6255   Chr_12: 312346-318600
e_gwEuk.11.7.1 (1 of 2) PTHR24075:SF0 - TRANSLOCATION PROTEIN SEC63 HOMOLOG O. lucimarinus v2.0 6718   Chr_11: 249908-256625
Thecc1EG045030 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) T. cacao v1.1 8180   scaffold_10r: 21843711-21851890
Migut.N01909 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. guttatus v2.0 7933   scaffold_14: 16100291-16108223
Migut.C00343 (1 of 4) PTHR24075:SF0 - TRANSLOCATION PROTEIN SEC63 HOMOLOG M. guttatus v2.0 8529   scaffold_3: 9045214-9053742
Cagra.6160s0001 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. grandiflora v1.1 8484   Scaffold6160: 1748-10231
Glyma.08G173500 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) G. max Wm82.a2.v1 8668   Chr08: 13819167-13827834
Glyma.15G253800 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) G. max Wm82.a2.v1 8682   Chr15: 48248032-48256713
Brara.H01126 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) B. rapa FPsc v1.3 9827   A08: 12930100-12939926
Bostr.7128s0687 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) B. stricta v1.2 8233   Scaffold7128: 3231253-3239485
Cre17.g744147 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) C. reinhardtii v5.6 18346   chromosome_17: 6687107-6705452
Medtr2g064740 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. truncatula Mt4.0v1 10168   chr2: 29260637-29270804
Medtr4g011450 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. truncatula Mt4.0v1 7430   chr4: 2793467-2800896
SapurV1A.0168s0170 (1 of 2) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) S. purpurea v1.0 10378   chr15: 19028901-19039278
evm_27.TU.AmTr_v1.0_scaffold00022.105 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) A. trichopoda v1.0 10385   AmTr_v1.0_scaffold00022: 1477675-1488059
Traes_6AS_FA72332F1 (1 of 6) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) T. aestivum v2.2 7837   ta_iwgsc_6as_v1_4380692: 2-7838
Traes_6BS_0CEF3C099 (1 of 6) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) T. aestivum v2.2 6780   ta_iwgsc_6bs_v1_672118: 1-6780

92 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29801.m003082 R. communis v0.1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Cucsa.252390.1 C. sativus v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
orange1.1g000114m C. sinensis v1.1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
AT1G20960.1 A. thaliana TAIR10 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Thhalv10016123m E. salsugineum v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Thhalv10006525m E. salsugineum v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Ciclev10010890m C. clementina v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Ciclev10004124m C. clementina v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Lus10016048 L. usitatissimum v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Lus10025168 L. usitatissimum v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Gorai.011G217300.1 G. raimondii v2.1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
65482 C. subellipsoidea C-169 v2.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
180659 M. pusilla CCMP1545 v3.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
98172 M. sp RCC299 v3.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
44002 O. lucimarinus v2.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Thecc1EG045030t1 T. cacao v1.1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Migut.N01909.1.p M. guttatus v2.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Migut.C00343.1.p M. guttatus v2.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Cagra.6160s0001.1.p C. grandiflora v1.1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Glyma.08G173500.1.p G. max Wm82.a2.v1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Glyma.15G253800.1.p G. max Wm82.a2.v1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Brara.H01126.1.p B. rapa FPsc v1.3 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Bostr.7128s0687.1.p B. stricta v1.2 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Cre17.g744147.t1.1 C. reinhardtii v5.6 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Medtr2g064740.1 M. truncatula Mt4.0v1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Medtr4g011450.1 M. truncatula Mt4.0v1 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
SapurV1A.0168s0170.1.p S. purpurea v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00022.105 A. trichopoda v1.0 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 1 5275 Viridiplantae
Traes_6AS_FA72332F1.1 T. aestivum v2.2 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae
Traes_6BS_0CEF3C099.1 T. aestivum v2.2 123428477 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed 2 5275 Viridiplantae