Protein Family : zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 123428286

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  357

357 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29841.t000078 (1 of 2) PTHR12547:SF70 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 R. communis v0.1 878   29841: 483296-484173
30054.t000019 (1 of 1) PTHR12547//PTHR12547:SF18 - CCCH ZINC FINGER/TIS11-RELATED // PROTEIN TIS11 R. communis v0.1 4725   30054: 115614-120338
28320.t000025 (1 of 2) PTHR12547:SF70 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 R. communis v0.1 1672   28320: 139679-141350
27843.t000005 (1 of 2) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 3365   27843: 34311-37675
27843.t000006 (1 of 2) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 3536   27843: 42883-46418
Cucsa.312990 (1 of 1) PTHR12547:SF18 - PROTEIN TIS11 C. sativus v1.0 2986   scaffold02995: 2283996-2286981
Cucsa.131910 (1 of 2) PTHR12547:SF70 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 C. sativus v1.0 2149   scaffold01037: 39837-41985
Cucsa.142970 (1 of 3) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN C. sativus v1.0 3131   scaffold01079: 1284590-1287720
Cucsa.242740 (1 of 1) PF00013//PF00642//PF14608 - KH domain (KH_1) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // RNA-binding, Nab2-type zinc finger (zf-CCCH_2) C. sativus v1.0 2910   scaffold02047: 2407423-2410332
Cucsa.263980 (1 of 3) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN C. sativus v1.0 6633   scaffold02330: 92105-98737
orange1.1g018874m.g (1 of 1) PTHR12547:SF18 - PROTEIN TIS11 C. sinensis v1.1 4288   scaffold00960: 12885-17172
orange1.1g022880m.g (1 of 2) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN C. sinensis v1.1 2436   scaffold00018: 1709348-1711783
orange1.1g022221m.g (1 of 2) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN C. sinensis v1.1 5410   scaffold00101: 131048-136457
orange1.1g019627m.g (1 of 1) PTHR12547:SF70 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 C. sinensis v1.1 2743   scaffold00005: 2453811-2456553
AT5G06770 (1 of 2) PTHR10288//PTHR10288:SF5 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 36-RELATED A. thaliana TAIR10 2248   Chr5: 2090703-2092950
AT3G12130 (1 of 2) PTHR10288//PTHR10288:SF5 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 36-RELATED A. thaliana TAIR10 2445   Chr3: 3864152-3866596
AT3G19360 (1 of 1) PTHR12547:SF70 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 A. thaliana TAIR10 1788   Chr3: 6707241-6709028
AT1G32360 (1 of 2) PTHR12547//PTHR12547:SF18 - CCCH ZINC FINGER/TIS11-RELATED // PROTEIN TIS11 A. thaliana TAIR10 2409   Chr1: 11672931-11675339
AT2G35430 (1 of 2) PTHR12547//PTHR12547:SF18 - CCCH ZINC FINGER/TIS11-RELATED // PROTEIN TIS11 A. thaliana TAIR10 1514   Chr2: 14900872-14902385
Thhalv10016994m.g (1 of 2) PTHR12547:SF18 - PROTEIN TIS11 E. salsugineum v1.0 1517   scaffold_10: 8182072-8183588
Thhalv10020894m.g (1 of 1) PTHR12547:SF70 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 E. salsugineum v1.0 1577   scaffold_13: 2538577-2540153
Thhalv10021405m.g (1 of 1) PTHR10288:SF5 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 36-RELATED E. salsugineum v1.0 2637   scaffold_13: 5473778-5476414
Thhalv10007908m.g (1 of 2) PTHR12547:SF18 - PROTEIN TIS11 E. salsugineum v1.0 2266   scaffold_5: 2708763-2711028
Ciclev10012360m.g (1 of 2) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN C. clementina v1.0 2607   scaffold_6: 18876866-18879472
Ciclev10008851m.g (1 of 1) PTHR12547:SF70 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 C. clementina v1.0 2745   scaffold_1: 4747930-4750674
Ciclev10016092m.g (1 of 2) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN C. clementina v1.0 5512   scaffold_2: 5135468-5140979
Ciclev10015789m.g (1 of 1) PTHR12547:SF18 - PROTEIN TIS11 C. clementina v1.0 4210   scaffold_2: 1581678-1585887
Lus10000486.g (1 of 2) PTHR12547:SF18 - PROTEIN TIS11 L. usitatissimum v1.0 1515   scaffold2945: 31498-33012
Lus10004183.g (1 of 5) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN L. usitatissimum v1.0 3015   scaffold2404: 169148-172162
Lus10021043.g (1 of 5) PTHR10288//PTHR10288:SF154 - KH DOMAIN CONTAINING RNA BINDING PROTEIN L. usitatissimum v1.0 2044   scaffold155: 260096-262139

357 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27843.m000162 R. communis v0.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
29841.m002814 R. communis v0.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
30054.m000804 R. communis v0.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
28320.m001098 R. communis v0.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
27843.m000161 R. communis v0.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Cucsa.242740.1 C. sativus v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Cucsa.142970.1 C. sativus v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Cucsa.131910.1 C. sativus v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Cucsa.312990.1 C. sativus v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Cucsa.263980.1 C. sativus v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
orange1.1g018874m C. sinensis v1.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
orange1.1g022880m C. sinensis v1.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
orange1.1g022221m C. sinensis v1.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
orange1.1g019627m C. sinensis v1.1 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
AT2G35430.1 A. thaliana TAIR10 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
AT1G32360.1 A. thaliana TAIR10 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
AT3G19360.1 A. thaliana TAIR10 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
AT3G12130.1 A. thaliana TAIR10 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
AT5G06770.1 A. thaliana TAIR10 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Thhalv10007908m E. salsugineum v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Thhalv10016994m E. salsugineum v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Thhalv10020894m E. salsugineum v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Thhalv10021405m E. salsugineum v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Ciclev10012360m C. clementina v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Ciclev10016092m C. clementina v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Ciclev10015789m C. clementina v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Ciclev10008851m C. clementina v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae
Lus10019431 L. usitatissimum v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 7 5275 Viridiplantae
Lus10021043 L. usitatissimum v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 7 5275 Viridiplantae
Lus10043287 L. usitatissimum v1.0 123428286 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 7 5275 Viridiplantae