Protein Family : light harvesting complex photosystem II 123428168

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  124

124 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
149722 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED S. moellendorffii v1.0 1285   scaffold_24: 936762-938046
29701.t000022 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED R. communis v0.1 1664   29701: 179105-180768
29669.t000052 (1 of 1) PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC R. communis v0.1 2074   29669: 326418-328491
Cucsa.067110 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. sativus v1.0 1597   scaffold00696: 1520811-1522407
orange1.1g028743m.g (1 of 1) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC C. sinensis v1.1 1534   scaffold00021: 579589-581122
AT5G01530 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. thaliana TAIR10 LHCB4.1 1509   Chr5: 208937-210445
AT3G08940 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. thaliana TAIR10 LHCB4.2 1209   Chr3: 2717675-2718883
AT2G40100 (1 of 1) PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC A. thaliana TAIR10 LHCB4.3 1748   Chr2: 16745653-16747400
Thhalv10017060m.g (1 of 1) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC E. salsugineum v1.0 1602   scaffold_10: 10596567-10598168
Thhalv10021263m.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1592   scaffold_13: 6671097-6672688
Thhalv10014055m.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1617   scaffold_2: 193819-195435
Ciclev10012370m.g (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. clementina v1.0 1830   scaffold_6: 16218093-16219922
Ciclev10032377m.g (1 of 1) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC C. clementina v1.0 1808   scaffold_4: 1119181-1120988
Lus10028299.g (1 of 4) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC L. usitatissimum v1.0 1681   scaffold327: 1107418-1109098
Lus10035512.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED L. usitatissimum v1.0 1285   scaffold464: 50509-51793
Lus10040191.g (1 of 4) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC L. usitatissimum v1.0 2056   scaffold86: 644674-646729
Gorai.002G263900 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED G. raimondii v2.1 1606   Chr02: 62433770-62435375
Gorai.010G198600 (1 of 2) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC G. raimondii v2.1 2009   Chr10: 55989491-55991499
Gorai.011G285900 (1 of 2) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC G. raimondii v2.1 3761   Chr11: 61813821-61817581
estExt_Genemark1.C_120367 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. subellipsoidea C-169 v2.0 3178   scaffold_12: 1820555-1823732
MicpuC2.POU_est_orfs.14_2937_4272324:2 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. pusilla CCMP1545 v3.0 1810   scaffold_14: 811006-812815
estExt_Genewise2.C_Chr_150046 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. sp RCC299 v3.0 1551   Chr_15: 58784-60334
eugene.1500010213 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED O. lucimarinus v2.0 1456   Chr_15: 381693-383148
Thecc1EG042535 (1 of 1) PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC T. cacao v1.1 2430   scaffold_10r: 1002571-1005000
Thecc1EG021708 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED T. cacao v1.1 1479   scaffold_5: 885060-886538
Migut.L02008 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. guttatus v2.0 1224   scaffold_12: 26444296-26445519
Cagra.2495s0010 (1 of 1) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC C. grandiflora v1.1 1323   Scaffold2495: 37415-38737
Cagra.4082s0032 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1354   Scaffold4082: 124518-125871
Cagra.22463s0002 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1120   Scaffold22463: 742-1861
Glyma.11G228800 (1 of 2) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC G. max Wm82.a2.v1 3933   Chr11: 32398995-32402927

124 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
149722 S. moellendorffii v1.0 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
29701.m000601 R. communis v0.1 123428168 light harvesting complex photosystem II 2 5275 Viridiplantae
29669.m000843 R. communis v0.1 123428168 light harvesting complex photosystem II 2 5275 Viridiplantae
Cucsa.067110.1 C. sativus v1.0 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
orange1.1g028743m C. sinensis v1.1 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
AT2G40100.1 A. thaliana TAIR10 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
AT5G01530.1 A. thaliana TAIR10 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
AT3G08940.2 A. thaliana TAIR10 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Thhalv10014055m E. salsugineum v1.0 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Thhalv10021263m E. salsugineum v1.0 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Thhalv10017060m E. salsugineum v1.0 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Ciclev10032377m C. clementina v1.0 123428168 light harvesting complex photosystem II 2 5275 Viridiplantae
Ciclev10012370m C. clementina v1.0 123428168 light harvesting complex photosystem II 2 5275 Viridiplantae
Lus10040191 L. usitatissimum v1.0 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Lus10028299 L. usitatissimum v1.0 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Lus10035512 L. usitatissimum v1.0 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Gorai.011G285900.1 G. raimondii v2.1 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Gorai.010G198600.1 G. raimondii v2.1 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Gorai.002G263900.1 G. raimondii v2.1 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
67011 C. subellipsoidea C-169 v2.0 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
70908 M. pusilla CCMP1545 v3.0 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
92498 M. sp RCC299 v3.0 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
27891 O. lucimarinus v2.0 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
Thecc1EG042535t1 T. cacao v1.1 123428168 light harvesting complex photosystem II 2 5275 Viridiplantae
Thecc1EG021708t1 T. cacao v1.1 123428168 light harvesting complex photosystem II 2 5275 Viridiplantae
Migut.L02008.1.p M. guttatus v2.0 123428168 light harvesting complex photosystem II 1 5275 Viridiplantae
Cagra.2495s0010.1.p C. grandiflora v1.1 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Cagra.22463s0002.1.p C. grandiflora v1.1 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Cagra.4082s0032.1.p C. grandiflora v1.1 123428168 light harvesting complex photosystem II 3 5275 Viridiplantae
Glyma.01G115900.1.p G. max Wm82.a2.v1 123428168 light harvesting complex photosystem II 4 5275 Viridiplantae