Protein Family : homeobox-3 123428035

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  616
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616 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
115439 (1 of 23) PF00046 - Homeobox domain (Homeobox) S. moellendorffii v1.0 261   scaffold_51: 1056452-1056712
29816.t000028 (1 of 1) PTHR24326//PTHR24326:SF224 - FAMILY NOT NAMED // WUSCHEL-RELATED HOMEOBOX 1-RELATED R. communis v0.1 1769   29816: 318726-320494
29830.t000069 (1 of 1) PTHR24326:SF275 - WUSCHEL-RELATED HOMEOBOX 10-RELATED R. communis v0.1 2262   29830: 528347-530608
29900.t000017 (1 of 51) PF00046 - Homeobox domain (Homeobox) R. communis v0.1 2140   29900: 92492-94631
30039.t000016 (1 of 1) PTHR24326:SF115 - WUSCHEL-RELATED HOMEOBOX 3 R. communis v0.1 557   30039: 89012-89568
30072.t000001 (1 of 51) PF00046 - Homeobox domain (Homeobox) R. communis v0.1 1540   30072: 7350-8889
30170.t000801 (1 of 51) PF00046 - Homeobox domain (Homeobox) R. communis v0.1 1026   30170: 4246671-4247696
29669.t000014 (1 of 51) PF00046 - Homeobox domain (Homeobox) R. communis v0.1 683   29669: 81538-82220
28102.t000001 (1 of 51) PF00046 - Homeobox domain (Homeobox) R. communis v0.1 2230   28102: 7331-9560
Cucsa.323040 (1 of 2) PTHR24326:SF220 - WUSCHEL-RELATED HOMEOBOX 13 C. sativus v1.0 3583   scaffold03080: 2576262-2579844
Cucsa.336980 (1 of 58) PF00046 - Homeobox domain (Homeobox) C. sativus v1.0 1326   scaffold03356: 127045-128370
Cucsa.379650 (1 of 1) PTHR24326:SF115 - WUSCHEL-RELATED HOMEOBOX 3 C. sativus v1.0 1703   scaffold03837: 56610-58312
Cucsa.046640 (1 of 58) PF00046 - Homeobox domain (Homeobox) C. sativus v1.0 2067   scaffold00542: 2029660-2031726
Cucsa.111520 (1 of 58) PF00046 - Homeobox domain (Homeobox) C. sativus v1.0 2807   scaffold00953: 292316-295122
Cucsa.121900 (1 of 58) PF00046 - Homeobox domain (Homeobox) C. sativus v1.0 2799   scaffold00999: 294308-297106
Cucsa.136500 (1 of 58) PF00046 - Homeobox domain (Homeobox) C. sativus v1.0 723   scaffold01044: 1122119-1122841
Cucsa.272210 (1 of 1) KOG0484//KOG0490 - Transcription factor PHOX2/ARIX, contains HOX domain // Transcription factor, contains HOX domain C. sativus v1.0 1699   scaffold02500: 862045-863743
orange1.1g036145m.g (1 of 51) PF00046 - Homeobox domain (Homeobox) C. sinensis v1.1 1699   scaffold00007: 370828-372526
orange1.1g022516m.g (1 of 2) PTHR24326:SF220 - WUSCHEL-RELATED HOMEOBOX 13 C. sinensis v1.1 2699   scaffold00017: 1530886-1533584
orange1.1g036802m.g (1 of 51) PF00046 - Homeobox domain (Homeobox) C. sinensis v1.1 683   scaffold00021: 784048-784730
orange1.1g047211m.g (1 of 51) PF00046 - Homeobox domain (Homeobox) C. sinensis v1.1 1595   scaffold00029: 799854-801448
orange1.1g043602m.g (1 of 51) PF00046 - Homeobox domain (Homeobox) C. sinensis v1.1 1997   scaffold00039: 298861-300857
orange1.1g035594m.g (1 of 1) PTHR24326:SF224 - WUSCHEL-RELATED HOMEOBOX 1-RELATED C. sinensis v1.1 1551   scaffold00034: 439462-441012
orange1.1g039144m.g (1 of 1) PTHR24326:SF115 - WUSCHEL-RELATED HOMEOBOX 3 C. sinensis v1.1 1418   scaffold00014: 899569-900986
orange1.1g026809m.g (1 of 2) PTHR24326:SF220 - WUSCHEL-RELATED HOMEOBOX 13 C. sinensis v1.1 2624   scaffold00002: 4661563-4664186
AT4G35550 (1 of 2) PTHR24326//PTHR24326:SF220 - FAMILY NOT NAMED // WUSCHEL-RELATED HOMEOBOX 13 A. thaliana TAIR10 WOX13 1786   Chr4: 16875521-16877306
AT5G05770 (1 of 71) PF00046 - Homeobox domain (Homeobox) A. thaliana TAIR10 WOX7 369   Chr5: 1734487-1734855
AT5G17810 (1 of 71) PF00046 - Homeobox domain (Homeobox) A. thaliana TAIR10 WOX12 4328   Chr5: 5880443-5884770
AT3G11260 (1 of 1) PTHR24326:SF149 - WUSCHEL-RELATED HOMEOBOX 5-RELATED A. thaliana TAIR10 WOX5 859   Chr3: 3527575-3528433
AT3G03660 (1 of 71) PF00046 - Homeobox domain (Homeobox) A. thaliana TAIR10 WOX11 2654   Chr3: 889509-892162

616 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
115439 S. moellendorffii v1.0 123428035 homeobox-3 1 5275 Viridiplantae
29816.m000691 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
29830.m001452 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
29900.m001555 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
30039.m000243 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
30072.m000927 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
30170.m014389 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
29669.m000805 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
28102.m000106 R. communis v0.1 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.272210.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.379650.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.323040.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.336980.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.046640.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.136500.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.111520.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
Cucsa.121900.1 C. sativus v1.0 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g022516m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g036145m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g036802m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g047211m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g043602m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g035594m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g039144m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
orange1.1g026809m C. sinensis v1.1 123428035 homeobox-3 8 5275 Viridiplantae
AT4G35550.1 A. thaliana TAIR10 123428035 homeobox-3 11 5275 Viridiplantae
AT5G05770.1 A. thaliana TAIR10 123428035 homeobox-3 11 5275 Viridiplantae
AT5G17810.1 A. thaliana TAIR10 123428035 homeobox-3 11 5275 Viridiplantae
AT3G11260.1 A. thaliana TAIR10 123428035 homeobox-3 11 5275 Viridiplantae
AT3G03660.2 A. thaliana TAIR10 123428035 homeobox-3 11 5275 Viridiplantae