Protein Family : zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 123426548

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  228

228 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
448779   S. moellendorffii v1.0 1221   scaffold_136: 122374-123594
30054.t000016 (1 of 38) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) R. communis v0.1 3280   30054: 98908-102187
30138.t000130 (1 of 7) PF01805 - Surp module (Surp) R. communis v0.1 6772   30138: 933403-940174
Cucsa.046380 (1 of 40) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sativus v1.0 7072   scaffold00542: 1885649-1892720
Cucsa.101030 (1 of 40) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sativus v1.0 13032   scaffold00927: 292279-305310
Cucsa.198330 (1 of 6) PF01805 - Surp module (Surp) C. sativus v1.0 7824   scaffold01357: 1409190-1417013
orange1.1g003507m.g (1 of 37) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sinensis v1.1 4142   scaffold00007: 122452-126593
orange1.1g043773m.g   C. sinensis v1.1 3777   scaffold00078: 318139-321915
orange1.1g000480m.g (1 of 7) PF01805 - Surp module (Surp) C. sinensis v1.1 7525   scaffold00030: 901143-908667
AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein A. thaliana TAIR10 3250   Chr3: 6413301-6416550
AT2G33835 (1 of 50) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) A. thaliana TAIR10 FES1 2914   Chr2: 14311787-14314700
Thhalv10016429m.g (1 of 50) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) E. salsugineum v1.0 3762   scaffold_10: 7516664-7520425
Thhalv10020512m.g   E. salsugineum v1.0 2399   scaffold_13: 2861338-2863736
Ciclev10018493m.g (1 of 7) PF01805 - Surp module (Surp) C. clementina v1.0 7318   scaffold_3: 8309803-8317120
Ciclev10014553m.g (1 of 39) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. clementina v1.0 2715   scaffold_2: 33632158-33634872
Lus10025447.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 2938   scaffold46: 720813-723750
Lus10002082.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 4379   scaffold575: 5302-9680
Lus10033487.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 3438   scaffold701: 210774-214211
Lus10003846.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 2259   scaffold706: 2251-4509
Lus10020889.g   L. usitatissimum v1.0 3537   scaffold711: 444370-447906
Lus10015319.g   L. usitatissimum v1.0 2899   scaffold924: 476063-478961
Gorai.003G068000 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 9022   Chr03: 14290666-14299687
Gorai.003G101900 (1 of 8) PF01805 - Surp module (Surp) G. raimondii v2.1 7655   Chr03: 31180248-31187902
Gorai.005G122500 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 5104   Chr05: 26524842-26529945
Gorai.009G167600 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 4893   Chr09: 12878947-12883839
Gorai.010G256500 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 6120   Chr10: 62131835-62137954
Thecc1EG001432 (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) T. cacao v1.1 8613   scaffold_1: 7124736-7133348
Thecc1EG014295 (1 of 7) PF01805 - Surp module (Surp) T. cacao v1.1 12907   scaffold_3: 21382457-21395363
Thecc1EG029826 (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) T. cacao v1.1 7323   scaffold_6: 24500422-24507744
Migut.I00513 (1 of 5) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) M. guttatus v2.0 5427   scaffold_9: 10762192-10767618

228 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
448779 S. moellendorffii v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 1 5275 Viridiplantae
30054.m000801 R. communis v0.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
30138.m003956 R. communis v0.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
Cucsa.046380.1 C. sativus v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
Cucsa.101030.1 C. sativus v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
Cucsa.198330.1 C. sativus v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
orange1.1g000480m C. sinensis v1.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
orange1.1g043773m C. sinensis v1.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
orange1.1g003507m C. sinensis v1.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
AT3G18640.1 A. thaliana TAIR10 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
AT2G33835.1 A. thaliana TAIR10 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
Thhalv10020512m E. salsugineum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
Thhalv10016429m E. salsugineum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
Ciclev10018493m C. clementina v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
Ciclev10014553m C. clementina v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 2 5275 Viridiplantae
Lus10003846 L. usitatissimum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 6 5275 Viridiplantae
Lus10020889 L. usitatissimum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 6 5275 Viridiplantae
Lus10015319 L. usitatissimum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 6 5275 Viridiplantae
Lus10002082 L. usitatissimum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 6 5275 Viridiplantae
Lus10033487 L. usitatissimum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 6 5275 Viridiplantae
Lus10025447 L. usitatissimum v1.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 6 5275 Viridiplantae
Gorai.009G167600.1 G. raimondii v2.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Gorai.010G256500.1 G. raimondii v2.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Gorai.003G068000.1 G. raimondii v2.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Gorai.003G101900.1 G. raimondii v2.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Gorai.005G122500.1 G. raimondii v2.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 5 5275 Viridiplantae
Thecc1EG029826t2 T. cacao v1.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
Thecc1EG014295t1 T. cacao v1.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
Thecc1EG001432t2 T. cacao v1.1 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 3 5275 Viridiplantae
Migut.C01037.1.p M. guttatus v2.0 123426548 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 4 5275 Viridiplantae