Protein Family : DNA LIGASE 6 123426430

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  478

478 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
415475 (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED S. moellendorffii v1.0 3909   scaffold_27: 1303698-1307606
29739.t000082 (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED R. communis v0.1 4627   29739: 510600-515226
30131.t000093 (1 of 1) PTHR23240//PTHR23240:SF6 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // DNA CROSS-LINK REPAIR 1A PROTEIN R. communis v0.1 2745   30131: 535597-538341
29615.t000020 (1 of 1) K15341 - DNA cross-link repair 1B protein [EC:3.1.-.-] (DCLRE1B, SNM1B) R. communis v0.1 2308   29615: 598600-600907
29691.t000006 (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED R. communis v0.1 3269   29691: 137577-140845
29462.t000005 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) R. communis v0.1 21065   29462: 147450-168514
29586.t000008 (1 of 1) PTHR10459//PTHR10459:SF38 - DNA LIGASE // DNA LIGASE R. communis v0.1 10873   29586: 60436-71308
29589.t000032 (1 of 3) K10747 - DNA ligase 1 (LIG1) R. communis v0.1 10722   29589: 239249-249970
Cucsa.385730 (1 of 1) PTHR10459:SF10 - DNA LIGASE 1 C. sativus v1.0 7578   scaffold03904: 988467-996044
Cucsa.271170 (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED C. sativus v1.0 6517   scaffold02500: 98577-105093
Cucsa.228400 (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED C. sativus v1.0 1350   scaffold01933: 322478-323827
orange1.1g040718m.g (1 of 1) PTHR23240//PTHR23240:SF9 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED C. sinensis v1.1 2812   scaffold05348: 620-3431
orange1.1g004877m.g (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED C. sinensis v1.1 5825   scaffold00013: 1030031-1035855
orange1.1g001045m.g (1 of 1) PTHR10459:SF38 - DNA LIGASE C. sinensis v1.1 9789   scaffold00042: 282759-292547
orange1.1g012419m.g (1 of 1) PF00753//PF07522 - Metallo-beta-lactamase superfamily (Lactamase_B) // DNA repair metallo-beta-lactamase (DRMBL) C. sinensis v1.1 3039   scaffold00041: 708324-711362
orange1.1g001082m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 C. sinensis v1.1 12379   scaffold00050: 352856-365234
orange1.1g003632m.g (1 of 1) PTHR10459:SF10 - DNA LIGASE 1 C. sinensis v1.1 10371   scaffold00061: 401421-411791
orange1.1g040343m.g (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED C. sinensis v1.1 4011   scaffold00213: 133096-137106
AT5G57160 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) A. thaliana TAIR10 ATLIG4 6782   Chr5: 23154965-23161746
AT3G26680 (1 of 1) PTHR23240//PTHR23240:SF6 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // DNA CROSS-LINK REPAIR 1A PROTEIN A. thaliana TAIR10 SNM1 3069   Chr3: 9801214-9804282
AT1G08130 (1 of 2) K10747 - DNA ligase 1 (LIG1) A. thaliana TAIR10 LIG1 5245   Chr1: 2542702-2547946
AT1G49250 (1 of 2) K10747 - DNA ligase 1 (LIG1) A. thaliana TAIR10 3724   Chr1: 18220533-18224256
AT1G27410 (1 of 1) K15341 - DNA cross-link repair 1B protein [EC:3.1.-.-] (DCLRE1B, SNM1B) A. thaliana TAIR10 1825   Chr1: 9517201-9519025
AT1G66730 (1 of 1) PTHR10459//PTHR10459:SF38 - DNA LIGASE // DNA LIGASE A. thaliana TAIR10 LIG6 7366   Chr1: 24884681-24892046
AT1G19025 (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED A. thaliana TAIR10 2087   Chr1: 6568853-6570939
AT2G45700 (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED A. thaliana TAIR10 3529   Chr2: 18827000-18830528
Thhalv10001995m.g (1 of 1) PTHR23240//PTHR23240:SF9 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED E. salsugineum v1.0 1626   scaffold_12: 10678620-10680245
Thhalv10028230m.g (1 of 6) 6.5.1.1 - DNA ligase (ATP) / Sealase E. salsugineum v1.0 3938   scaffold_14: 5218407-5222344
Thhalv10012474m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 E. salsugineum v1.0 7134   scaffold_2: 9406894-9414027
Thhalv10001326m.g (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED E. salsugineum v1.0 3647   scaffold_22: 953954-957600

478 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
415475 S. moellendorffii v1.0 123426430 DNA LIGASE 6 1 5275 Viridiplantae
29589.m001253 R. communis v0.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
29691.m000283 R. communis v0.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
29462.m000377 R. communis v0.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
29586.m000603 R. communis v0.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
29739.m003646 R. communis v0.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
30131.m006942 R. communis v0.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
29615.m000508 R. communis v0.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
Cucsa.271170.1 C. sativus v1.0 123426430 DNA LIGASE 6 3 5275 Viridiplantae
Cucsa.228400.1 C. sativus v1.0 123426430 DNA LIGASE 6 3 5275 Viridiplantae
Cucsa.385730.1 C. sativus v1.0 123426430 DNA LIGASE 6 3 5275 Viridiplantae
orange1.1g040343m C. sinensis v1.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
orange1.1g040718m C. sinensis v1.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
orange1.1g004877m C. sinensis v1.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
orange1.1g001045m C. sinensis v1.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
orange1.1g012419m C. sinensis v1.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
orange1.1g001082m C. sinensis v1.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
orange1.1g003632m C. sinensis v1.1 123426430 DNA LIGASE 6 7 5275 Viridiplantae
AT1G66730.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
AT1G19025.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
AT2G45700.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
AT5G57160.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
AT3G26680.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
AT1G08130.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
AT1G49250.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
AT1G27410.1 A. thaliana TAIR10 123426430 DNA LIGASE 6 8 5275 Viridiplantae
Thhalv10006843m E. salsugineum v1.0 123426430 DNA LIGASE 6 8 5275 Viridiplantae
Thhalv10004102m E. salsugineum v1.0 123426430 DNA LIGASE 6 8 5275 Viridiplantae
Thhalv10018010m E. salsugineum v1.0 123426430 DNA LIGASE 6 8 5275 Viridiplantae
Thhalv10001995m E. salsugineum v1.0 123426430 DNA LIGASE 6 8 5275 Viridiplantae