Protein Family : homeobox and START domains containing protein, putative, expressed 123381934

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  337

337 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29842.t000130 (1 of 1) PTHR24326//PTHR24326:SF294 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED R. communis v0.1 3306   29842: 658003-661308
30146.t000145 (1 of 1) PTHR24326//PTHR24326:SF272 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 R. communis v0.1 5287   30146: 1069995-1075281
30174.t000366 (1 of 7) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) R. communis v0.1 5328   30174: 1284131-1289458
29600.t000005 (1 of 5) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) R. communis v0.1 4288   29600: 99375-103662
Cucsa.363170 (1 of 11) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) C. sativus v1.0 5753   scaffold03611: 766719-772471
Cucsa.045360 (1 of 11) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) C. sativus v1.0 7800   scaffold00542: 1298612-1306411
Cucsa.072780 (1 of 11) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) C. sativus v1.0 5193   scaffold00765: 298168-303360
Cucsa.359250 (1 of 3) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 C. sativus v1.0 4932   scaffold03588: 232857-237788
orange1.1g004294m.g (1 of 6) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) C. sinensis v1.1 7154   scaffold00778: 10629-17782
orange1.1g004271m.g (1 of 1) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 C. sinensis v1.1 4473   scaffold00096: 191465-195937
orange1.1g002869m.g (1 of 1) KOG0485 - Transcription factor NKX-5.1/HMX1, contains HOX domain C. sinensis v1.1 6094   scaffold00001: 1670910-1677003
AT3G61150 (1 of 37) K09338 - homeobox-leucine zipper protein (HD-ZIP) A. thaliana TAIR10 HDG1 4516   Chr3: 22630608-22635123
AT4G00730 (1 of 37) K09338 - homeobox-leucine zipper protein (HD-ZIP) A. thaliana TAIR10 ANL2 5150   Chr4: 299359-304508
AT4G04890 (1 of 2) PTHR24326//PTHR24326:SF294 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED A. thaliana TAIR10 PDF2 5857   Chr4: 2476489-2482345
AT4G21750 (1 of 2) PTHR24326//PTHR24326:SF294 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED A. thaliana TAIR10 ATML1 5548   Chr4: 11555186-11560733
AT1G05230 (1 of 1) PTHR24326//PTHR24326:SF239 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG2 A. thaliana TAIR10 HDG2 5910   Chr1: 1512896-1518805
AT1G79840 (1 of 1) PTHR24326//PTHR24326:SF272 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 A. thaliana TAIR10 GL2 4485   Chr1: 30036956-30041440
Thhalv10024488m.g (1 of 16) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) E. salsugineum v1.0 3864   scaffold_1: 7891286-7895149
Thhalv10005786m.g (1 of 16) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) E. salsugineum v1.0 4685   scaffold_19: 844156-848840
Thhalv10001317m.g (1 of 16) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) E. salsugineum v1.0 3515   scaffold_22: 975140-978654
Thhalv10028459m.g (1 of 1) PTHR24326:SF294 - HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED E. salsugineum v1.0 6290   scaffold_3: 2194186-2200475
Thhalv10028440m.g (1 of 16) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) E. salsugineum v1.0 5325   scaffold_3: 282350-287674
Thhalv10006934m.g (1 of 16) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) E. salsugineum v1.0 4062   scaffold_5: 14098950-14103011
Thhalv10018234m.g (1 of 1) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 E. salsugineum v1.0 3976   scaffold_9: 50021-53996
Ciclev10018855m.g (1 of 1) KOG0485 - Transcription factor NKX-5.1/HMX1, contains HOX domain C. clementina v1.0 6126   scaffold_3: 49318106-49324231
Ciclev10024950m.g (1 of 1) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 C. clementina v1.0 4580   scaffold_7: 8888125-8892704
Ciclev10014424m.g (1 of 8) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) C. clementina v1.0 4714   scaffold_2: 32195147-32199860
Ciclev10014373m.g (1 of 8) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) C. clementina v1.0 6433   scaffold_2: 21915246-21921678
Lus10011440.g (1 of 2) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 L. usitatissimum v1.0 4370   scaffold1578: 110330-114699
Lus10007650.g (1 of 4) PTHR24326:SF294 - HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED L. usitatissimum v1.0 3082   scaffold121: 236828-239909

337 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29600.m000538 R. communis v0.1 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
30146.m003568 R. communis v0.1 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
29842.m003633 R. communis v0.1 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
30174.m008969 R. communis v0.1 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Cucsa.363170.1 C. sativus v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Cucsa.359250.1 C. sativus v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Cucsa.072780.1 C. sativus v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Cucsa.045360.1 C. sativus v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
orange1.1g002869m C. sinensis v1.1 123381934 homeobox and START domains containing protein, putative, expressed 3 5275 Viridiplantae
orange1.1g004294m C. sinensis v1.1 123381934 homeobox and START domains containing protein, putative, expressed 3 5275 Viridiplantae
orange1.1g004271m C. sinensis v1.1 123381934 homeobox and START domains containing protein, putative, expressed 3 5275 Viridiplantae
AT1G79840.2 A. thaliana TAIR10 123381934 homeobox and START domains containing protein, putative, expressed 6 5275 Viridiplantae
AT3G61150.1 A. thaliana TAIR10 123381934 homeobox and START domains containing protein, putative, expressed 6 5275 Viridiplantae
AT4G00730.1 A. thaliana TAIR10 123381934 homeobox and START domains containing protein, putative, expressed 6 5275 Viridiplantae
AT4G04890.1 A. thaliana TAIR10 123381934 homeobox and START domains containing protein, putative, expressed 6 5275 Viridiplantae
AT4G21750.1 A. thaliana TAIR10 123381934 homeobox and START domains containing protein, putative, expressed 6 5275 Viridiplantae
AT1G05230.1 A. thaliana TAIR10 123381934 homeobox and START domains containing protein, putative, expressed 6 5275 Viridiplantae
Thhalv10018234m E. salsugineum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 7 5275 Viridiplantae
Thhalv10024488m E. salsugineum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 7 5275 Viridiplantae
Thhalv10005786m E. salsugineum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 7 5275 Viridiplantae
Thhalv10001317m E. salsugineum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 7 5275 Viridiplantae
Thhalv10028459m E. salsugineum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 7 5275 Viridiplantae
Thhalv10028440m E. salsugineum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 7 5275 Viridiplantae
Thhalv10006934m E. salsugineum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 7 5275 Viridiplantae
Ciclev10014373m C. clementina v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Ciclev10018855m C. clementina v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Ciclev10024950m C. clementina v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Ciclev10014424m C. clementina v1.0 123381934 homeobox and START domains containing protein, putative, expressed 4 5275 Viridiplantae
Lus10031933 L. usitatissimum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 11 5275 Viridiplantae
Lus10025940 L. usitatissimum v1.0 123381934 homeobox and START domains containing protein, putative, expressed 11 5275 Viridiplantae