Protein Family : ubiquitin 8 121351277

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  553

553 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30169.t000100 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) R. communis v0.1 1253   30169: 489546-490798
28617.t000002 (1 of 7) K08770 - ubiquitin C (UBC) R. communis v0.1 474   28617: 31610-32083
Cucsa.118440 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sativus v1.0 3058   scaffold00998: 336804-339861
Cucsa.059730 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sativus v1.0 462   scaffold00621: 287985-288446
Cucsa.230310 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sativus v1.0 744   scaffold01956: 1-744
Cucsa.266970 (1 of 6) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein C. sativus v1.0 2029   scaffold02364: 12091-14119
orange1.1g040824m.g (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sinensis v1.1 1766   scaffold00097: 53662-55427
orange1.1g036691m.g (1 of 2) PTHR10666:SF124 - GH17761P C. sinensis v1.1 1281   scaffold00088: 48759-50039
orange1.1g009518m.g (1 of 2) PTHR10666:SF150 - POLYUBIQUITIN 3 C. sinensis v1.1 2783   scaffold00152: 216388-219170
orange1.1g012714m.g (1 of 2) PTHR10666:SF150 - POLYUBIQUITIN 3 C. sinensis v1.1 2361   scaffold00191: 130881-133241
orange1.1g048350m.g (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sinensis v1.1 360   scaffold00191: 230978-231337
orange1.1g026940m.g (1 of 16) KOG0001 - Ubiquitin and ubiquitin-like proteins C. sinensis v1.1 1725   scaffold00400: 111111-112835
orange1.1g026932m.g (1 of 16) KOG0001 - Ubiquitin and ubiquitin-like proteins C. sinensis v1.1 1673   scaffold00172: 256273-257945
orange1.1g023198m.g (1 of 2) PTHR10666:SF124 - GH17761P C. sinensis v1.1 1742   scaffold00591: 49336-51077
AT4G02890 (1 of 3) K04551//K08770 - ubiquitin B (UBB) // ubiquitin C (UBC) A. thaliana TAIR10 UBQ14 1502   Chr4: 1278530-1280031
AT4G05320 (1 of 1) PTHR10666//PTHR10666:SF150//PTHR10666:SF155 - UBIQUITIN // POLYUBIQUITIN 3 // POLYUBIQUITIN 4 A. thaliana TAIR10 UBQ10 2139   Chr4: 2718170-2720308
AT4G05050 (1 of 1) K04551//K08770//K12158 - ubiquitin B (UBB) // ubiquitin C (UBC) // ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 UBQ11 1383   Chr4: 2588004-2589386
AT5G03240 (1 of 3) K04551//K08770 - ubiquitin B (UBB) // ubiquitin C (UBC) A. thaliana TAIR10 UBQ3 1791   Chr5: 771725-773515
AT5G20620 (1 of 1) PTHR10666//PTHR10666:SF155 - UBIQUITIN // POLYUBIQUITIN 4 A. thaliana TAIR10 UBQ4 1876   Chr5: 6973071-6974946
AT3G09790 (1 of 1) PTHR10666//PTHR10666:SF120 - UBIQUITIN // POLYUBIQUITIN 8-RELATED A. thaliana TAIR10 UBQ8 2331   Chr3: 3003862-3006192
AT1G31340 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 RUB1 1614   Chr1: 11217845-11219458
AT1G55060 (1 of 13) K08770 - ubiquitin C (UBC) A. thaliana TAIR10 UBQ12 693   Chr1: 20549533-20550225
AT2G35635 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 UBQ7 1147   Chr2: 14980970-14982116
Thhalv10017351m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 1421   scaffold_10: 8289779-8291199
Thhalv10022008m.g (1 of 20) KOG0001 - Ubiquitin and ubiquitin-like proteins E. salsugineum v1.0 699   scaffold_13: 6393569-6394267
Thhalv10028224m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 705   scaffold_14: 3270000-3270704
Thhalv10028728m.g (1 of 3) PTHR10666:SF155 - POLYUBIQUITIN 4 E. salsugineum v1.0 1945   scaffold_3: 1938112-1940056
Thhalv10028730m.g (1 of 3) PTHR10666:SF155 - POLYUBIQUITIN 4 E. salsugineum v1.0 1985   scaffold_3: 1924916-1926900
Thhalv10008986m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 1851   scaffold_5: 3597669-3599519
Thhalv10011466m.g (1 of 1) PTHR10666:SF150 - POLYUBIQUITIN 3 E. salsugineum v1.0 2246   scaffold_7: 4566838-4569083

553 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30169.m006323 R. communis v0.1 121351277 ubiquitin 8 2 5274 Embryophyte
28617.m000205 R. communis v0.1 121351277 ubiquitin 8 2 5274 Embryophyte
Cucsa.266970.1 C. sativus v1.0 121351277 ubiquitin 8 4 5274 Embryophyte
Cucsa.118440.1 C. sativus v1.0 121351277 ubiquitin 8 4 5274 Embryophyte
Cucsa.059730.1 C. sativus v1.0 121351277 ubiquitin 8 4 5274 Embryophyte
Cucsa.230310.1 C. sativus v1.0 121351277 ubiquitin 8 4 5274 Embryophyte
orange1.1g048350m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
orange1.1g026940m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
orange1.1g026932m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
orange1.1g023198m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
orange1.1g040824m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
orange1.1g036691m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
orange1.1g009518m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
orange1.1g012714m C. sinensis v1.1 121351277 ubiquitin 8 8 5274 Embryophyte
AT5G03240.1 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT4G02890.3 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT4G05320.2 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT4G05050.1 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT5G20620.1 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT3G09790.1 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT1G31340.1 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT1G55060.1 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
AT2G35635.1 A. thaliana TAIR10 121351277 ubiquitin 8 9 5274 Embryophyte
Thhalv10017351m E. salsugineum v1.0 121351277 ubiquitin 8 8 5274 Embryophyte
Thhalv10022008m E. salsugineum v1.0 121351277 ubiquitin 8 8 5274 Embryophyte
Thhalv10028224m E. salsugineum v1.0 121351277 ubiquitin 8 8 5274 Embryophyte
Thhalv10028728m E. salsugineum v1.0 121351277 ubiquitin 8 8 5274 Embryophyte
Thhalv10028730m E. salsugineum v1.0 121351277 ubiquitin 8 8 5274 Embryophyte
Thhalv10008986m E. salsugineum v1.0 121351277 ubiquitin 8 8 5274 Embryophyte
Thhalv10011466m E. salsugineum v1.0 121351277 ubiquitin 8 8 5274 Embryophyte