Protein Family : DNA ligase IV 121346093

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  63

63 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29462.t000005 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) R. communis v0.1 21065   29462: 147450-168514
orange1.1g001082m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 C. sinensis v1.1 12379   scaffold00050: 352856-365234
AT5G57160 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) A. thaliana TAIR10 ATLIG4 6782   Chr5: 23154965-23161746
Thhalv10012474m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 E. salsugineum v1.0 7134   scaffold_2: 9406894-9414027
Ciclev10007283m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 C. clementina v1.0 11623   scaffold_1: 26692878-26704500
Lus10020013.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 L. usitatissimum v1.0 7166   scaffold23: 416793-423958
Gorai.013G243100 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 G. raimondii v2.1 11037   Chr13: 56252514-56263550
Thecc1EG039460 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) T. cacao v1.1 59213   scaffold_9: 19431314-19490526
Migut.J00793 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 M. guttatus v2.0 10298   scaffold_10: 4714458-4724755
Araha.8614s0002 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 A. halleri v1.1 5655   Scaffold8614: 3246-8900
Cagra.0931s0001 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 C. grandiflora v1.1 7291   Scaffold931: 3384-10674
Glyma.09G060100 (1 of 2) PTHR10459:SF72 - DNA LIGASE 4 G. max Wm82.a2.v1 9718   Chr09: 5561072-5570789
Glyma.15G166700 (1 of 2) PTHR10459:SF72 - DNA LIGASE 4 G. max Wm82.a2.v1 19817   Chr15: 14523368-14543184
Brara.J01141 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 B. rapa FPsc v1.3 7036   A10: 10866667-10873702
Bostr.26833s0542 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 B. stricta v1.2 7010   Scaffold26833: 2816495-2823504
Medtr2g038030 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 M. truncatula Mt4.0v1 14841   chr2: 16517930-16532770
SapurV1A.0140s0200 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) S. purpurea v1.0 11573   chr18: 14370594-14382166
evm_27.TU.AmTr_v1.0_scaffold00025.169 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 A. trichopoda v1.0 28573   AmTr_v1.0_scaffold00025: 2222704-2251276
Traes_2BL_1EE2E375F (1 of 3) PTHR10459:SF72 - DNA LIGASE 4 T. aestivum v2.2 9838   ta_iwgsc_2bl_v1_8093120: 10966-20803
Traes_2DL_E65978A75 (1 of 3) PTHR10459:SF72 - DNA LIGASE 4 T. aestivum v2.2 10635   ta_iwgsc_2dl_v1_9888404: 359-10993
Eucgr.C00108 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 E. grandis v2.0 8905   Chr03: 717907-726811
Prupe.1G074600 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 P. persica v2.1 16269   Pp01: 5341126-5357394
GSMUA_Achr1G23620_001 (1 of 4) 6.5.1.1 - DNA ligase (ATP) / Sealase M. acuminata v1 26964   chr1: 18020035-18046998
Manes.14G158800 (1 of 2) PTHR10459:SF72 - DNA LIGASE 4 M. esculenta v6.1 29201   Chromosome14: 18903135-18932335
Kalax.0017s0050 (1 of 1) PF01068//PF04675//PF04679//PF12738 - ATP dependent DNA ligase domain (DNA_ligase_A_M) // DNA ligase N terminus (DNA_ligase_A_N) // ATP dependent DNA ligase C terminal region (DNA_ligase_A_C) // twin BRCT domain (PTCB-BRCT) K. laxiflora v1.1 9010   scaffold_17: 338494-347503
Kalax.0360s0047 (1 of 1) PF01068//PF04675//PF12738 - ATP dependent DNA ligase domain (DNA_ligase_A_M) // DNA ligase N terminus (DNA_ligase_A_N) // twin BRCT domain (PTCB-BRCT) K. laxiflora v1.1 8412   scaffold_360: 263290-271701
Sphfalx0033s0144 (1 of 6) 6.5.1.1 - DNA ligase (ATP) / Sealase S. fallax v0.5 9634   super_33: 2054985-2064618
Sphfalx0018s0240 (1 of 1) PF11411 - DNA ligase IV (DNA_ligase_IV) S. fallax v0.5 9894   super_18: 3288674-3298567
Seita.7G229000 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 S. italica v2.2 8573   scaffold_7: 29295512-29304084
Bradi5g20927 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 B. distachyon v3.1 8739   Bd5: 23864449-23873187

63 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29462.m000377 R. communis v0.1 121346093 DNA ligase IV 1 5274 Embryophyte
orange1.1g001082m C. sinensis v1.1 121346093 DNA ligase IV 1 5274 Embryophyte
AT5G57160.1 A. thaliana TAIR10 121346093 DNA ligase IV 1 5274 Embryophyte
Thhalv10012474m E. salsugineum v1.0 121346093 DNA ligase IV 1 5274 Embryophyte
Ciclev10007283m C. clementina v1.0 121346093 DNA ligase IV 1 5274 Embryophyte
Lus10020013 L. usitatissimum v1.0 121346093 DNA ligase IV 1 5274 Embryophyte
Gorai.013G243100.1 G. raimondii v2.1 121346093 DNA ligase IV 1 5274 Embryophyte
Thecc1EG039460t1 T. cacao v1.1 121346093 DNA ligase IV 1 5274 Embryophyte
Migut.J00793.1.p M. guttatus v2.0 121346093 DNA ligase IV 1 5274 Embryophyte
Araha.8614s0002.1.p A. halleri v1.1 121346093 DNA ligase IV 1 5274 Embryophyte
Cagra.0931s0001.1.p C. grandiflora v1.1 121346093 DNA ligase IV 1 5274 Embryophyte
Glyma.09G060100.1.p G. max Wm82.a2.v1 121346093 DNA ligase IV 2 5274 Embryophyte
Glyma.15G166700.1.p G. max Wm82.a2.v1 121346093 DNA ligase IV 2 5274 Embryophyte
Brara.J01141.1.p B. rapa FPsc v1.3 121346093 DNA ligase IV 1 5274 Embryophyte
Bostr.26833s0542.1.p B. stricta v1.2 121346093 DNA ligase IV 1 5274 Embryophyte
Medtr2g038030.1 M. truncatula Mt4.0v1 121346093 DNA ligase IV 1 5274 Embryophyte
SapurV1A.0140s0200.1.p S. purpurea v1.0 121346093 DNA ligase IV 1 5274 Embryophyte
evm_27.model.AmTr_v1.0_scaffold00025.169 A. trichopoda v1.0 121346093 DNA ligase IV 1 5274 Embryophyte
Traes_2BL_1EE2E375F.1 T. aestivum v2.2 121346093 DNA ligase IV 2 5274 Embryophyte
Traes_2DL_E65978A75.1 T. aestivum v2.2 121346093 DNA ligase IV 2 5274 Embryophyte
Eucgr.C00108.1.p E. grandis v2.0 121346093 DNA ligase IV 1 5274 Embryophyte
Prupe.1G074600.1.p P. persica v2.1 121346093 DNA ligase IV 1 5274 Embryophyte
GSMUA_Achr1P23620_001 M. acuminata v1 121346093 DNA ligase IV 1 5274 Embryophyte
Manes.14G158800.1.p M. esculenta v6.1 121346093 DNA ligase IV 1 5274 Embryophyte
Kalax.0017s0050.1.p K. laxiflora v1.1 121346093 DNA ligase IV 2 5274 Embryophyte
Kalax.0360s0047.1.p K. laxiflora v1.1 121346093 DNA ligase IV 2 5274 Embryophyte
Sphfalx0033s0144.1.p S. fallax v0.5 121346093 DNA ligase IV 2 5274 Embryophyte
Sphfalx0018s0240.1.p S. fallax v0.5 121346093 DNA ligase IV 2 5274 Embryophyte
Seita.7G229000.1.p S. italica v2.2 121346093 DNA ligase IV 1 5274 Embryophyte
Bradi5g20927.1.p B. distachyon v3.1 121346093 DNA ligase IV 1 5274 Embryophyte