Protein Family : retrotransposon protein, putative, unclassified, expressed 121344592

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  204

204 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29794.t000104 (1 of 6) PF16719 - SAWADEE domain (SAWADEE) R. communis v0.1 3104   29794: 684963-688066
30146.t000094 (1 of 1) PTHR33827//PTHR33827:SF1 - FAMILY NOT NAMED // PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 R. communis v0.1 4669   30146: 723280-727948
30209.t000009 (1 of 1) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 R. communis v0.1 7232   30209: 250821-258052
Cucsa.032420 (1 of 1) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 C. sativus v1.0 5717   scaffold00429: 1719778-1725494
Cucsa.312480 (1 of 4) PF16719 - SAWADEE domain (SAWADEE) C. sativus v1.0 5296   scaffold02995: 1870420-1875715
Cucsa.361080 (1 of 1) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 C. sativus v1.0 4067   scaffold03588: 1518031-1522097
orange1.1g016887m.g (1 of 1) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 C. sinensis v1.1 5297   scaffold00076: 451032-456328
orange1.1g026004m.g (1 of 1) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 C. sinensis v1.1 4201   scaffold00175: 73031-77231
orange1.1g025634m.g (1 of 3) PF16719 - SAWADEE domain (SAWADEE) C. sinensis v1.1 3304   scaffold00005: 1068400-1071703
AT3G18380 (1 of 1) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 A. thaliana TAIR10 2584   Chr3: 6310736-6313319
AT1G15215 (1 of 1) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 A. thaliana TAIR10 1987   Chr1: 5238065-5240051
Thhalv10021077m.g (1 of 1) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 E. salsugineum v1.0 3136   scaffold_13: 2964593-2967728
Thhalv10008534m.g (1 of 1) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 E. salsugineum v1.0 2164   scaffold_5: 10230242-10232405
Ciclev10026320m.g (1 of 1) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 C. clementina v1.0 4074   scaffold_7: 8483966-8488039
Ciclev10008640m.g (1 of 1) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 C. clementina v1.0 5786   scaffold_1: 16444731-16450516
Ciclev10009238m.g (1 of 4) PF16719 - SAWADEE domain (SAWADEE) C. clementina v1.0 3297   scaffold_1: 3397423-3400719
Lus10013684.g (1 of 2) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 L. usitatissimum v1.0 2164   scaffold1168: 42112-44275
Lus10014151.g (1 of 4) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 L. usitatissimum v1.0 1515   scaffold231: 86424-87938
Lus10038276.g (1 of 4) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 L. usitatissimum v1.0 2391   scaffold28: 528490-530880
Lus10005480.g (1 of 9) PF16719 - SAWADEE domain (SAWADEE) L. usitatissimum v1.0 4367   scaffold368: 36821-41187
Lus10025826.g (1 of 4) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 L. usitatissimum v1.0 2417   scaffold605: 560595-563011
Lus10017944.g (1 of 2) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 L. usitatissimum v1.0 2108   scaffold687: 41089-43196
Gorai.013G219600 (1 of 8) PF16719 - SAWADEE domain (SAWADEE) G. raimondii v2.1 3942   Chr13: 53941202-53945143
Gorai.013G172000 (1 of 3) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 G. raimondii v2.1 3311   Chr13: 45846117-45849427
Gorai.009G048700 (1 of 8) PF16719 - SAWADEE domain (SAWADEE) G. raimondii v2.1 3237   Chr09: 3534290-3537526
Gorai.006G174100   G. raimondii v2.1 2893   Chr06: 43278764-43281656
Gorai.011G072000 (1 of 1) PTHR33827:SF1 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 G. raimondii v2.1 3253   Chr11: 6689676-6692928
Thecc1EG021962 (1 of 2) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 T. cacao v1.1 4560   scaffold_5: 1969646-1974205
Thecc1EG028873 (1 of 1) PTHR33827//PTHR33827:SF1 - FAMILY NOT NAMED // PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 T. cacao v1.1 3894   scaffold_6: 19010822-19014715
Thecc1EG046875 (1 of 2) PTHR33827:SF3 - PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 T. cacao v1.1 4874   scaffold_7: 6121226-6126099

204 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30209.m001510 R. communis v0.1 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
29794.m003405 R. communis v0.1 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
30146.m003517 R. communis v0.1 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
Cucsa.032420.1 C. sativus v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
Cucsa.361080.1 C. sativus v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
Cucsa.312480.1 C. sativus v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
orange1.1g026004m C. sinensis v1.1 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
orange1.1g025634m C. sinensis v1.1 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
orange1.1g016887m C. sinensis v1.1 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
AT1G15215.2 A. thaliana TAIR10 121344592 retrotransposon protein, putative, unclassified, expressed 2 5274 Embryophyte
AT3G18380.2 A. thaliana TAIR10 121344592 retrotransposon protein, putative, unclassified, expressed 2 5274 Embryophyte
Thhalv10021077m E. salsugineum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 2 5274 Embryophyte
Thhalv10008534m E. salsugineum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 2 5274 Embryophyte
Ciclev10009238m C. clementina v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
Ciclev10026320m C. clementina v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
Ciclev10008640m C. clementina v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 3 5274 Embryophyte
Lus10005480 L. usitatissimum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 6 5274 Embryophyte
Lus10025826 L. usitatissimum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 6 5274 Embryophyte
Lus10017944 L. usitatissimum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 6 5274 Embryophyte
Lus10013684 L. usitatissimum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 6 5274 Embryophyte
Lus10014151 L. usitatissimum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 6 5274 Embryophyte
Lus10038276 L. usitatissimum v1.0 121344592 retrotransposon protein, putative, unclassified, expressed 6 5274 Embryophyte
Gorai.011G072000.1 G. raimondii v2.1 121344592 retrotransposon protein, putative, unclassified, expressed 5 5274 Embryophyte
Gorai.013G172000.1 G. raimondii v2.1 121344592 retrotransposon protein, putative, unclassified, expressed 5 5274 Embryophyte
Gorai.013G219600.1 G. raimondii v2.1 121344592 retrotransposon protein, putative, unclassified, expressed 5 5274 Embryophyte
Gorai.009G048700.1 G. raimondii v2.1 121344592 retrotransposon protein, putative, unclassified, expressed 5 5274 Embryophyte
Gorai.006G174100.1 G. raimondii v2.1 121344592 retrotransposon protein, putative, unclassified, expressed 5 5274 Embryophyte
Thecc1EG021962t2 T. cacao v1.1 121344592 retrotransposon protein, putative, unclassified, expressed 4 5274 Embryophyte
Thecc1EG028873t1 T. cacao v1.1 121344592 retrotransposon protein, putative, unclassified, expressed 4 5274 Embryophyte
Thecc1EG046875t1 T. cacao v1.1 121344592 retrotransposon protein, putative, unclassified, expressed 4 5274 Embryophyte