Protein Family : U5 small nuclear ribonucleoprotein helicase, putative 121343897

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  72

72 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29801.t000027 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) R. communis v0.1 6416   29801: 173978-180393
Cucsa.252390 (1 of 1) PF00270//PF00271//PF02889//PF04851 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) // Type III restriction enzyme, res subunit (ResIII) C. sativus v1.0 8750   scaffold02229: 1298967-1307716
orange1.1g000114m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. sinensis v1.1 8553   scaffold00299: 12022-20574
AT1G20960 (1 of 2) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) A. thaliana TAIR10 emb1507 8503   Chr1: 7301748-7310250
Thhalv10006525m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) E. salsugineum v1.0 7742   scaffold_5: 8238732-8246473
Ciclev10010890m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. clementina v1.0 8031   scaffold_6: 7580996-7589026
Ciclev10004124m.g (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. clementina v1.0 8126   scaffold_9: 29008034-29016159
Lus10016048.g (1 of 6) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) L. usitatissimum v1.0 6966   scaffold172: 411198-418163
Gorai.011G217300 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) G. raimondii v2.1 7863   Chr11: 52330942-52338804
Thecc1EG045030 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) T. cacao v1.1 8180   scaffold_10r: 21843711-21851890
Migut.N01909 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. guttatus v2.0 7933   scaffold_14: 16100291-16108223
Migut.C00343 (1 of 4) PTHR24075:SF0 - TRANSLOCATION PROTEIN SEC63 HOMOLOG M. guttatus v2.0 8529   scaffold_3: 9045214-9053742
Cagra.6160s0001 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) C. grandiflora v1.1 8484   Scaffold6160: 1748-10231
Glyma.08G173500 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) G. max Wm82.a2.v1 8668   Chr08: 13819167-13827834
Glyma.15G253800 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) G. max Wm82.a2.v1 8682   Chr15: 48248032-48256713
Brara.H01126 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) B. rapa FPsc v1.3 9827   A08: 12930100-12939926
Bostr.7128s0687 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) B. stricta v1.2 8233   Scaffold7128: 3231253-3239485
Medtr2g064740 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. truncatula Mt4.0v1 10168   chr2: 29260637-29270804
Medtr4g011450 (1 of 4) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. truncatula Mt4.0v1 7430   chr4: 2793467-2800896
SapurV1A.0168s0170 (1 of 2) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) S. purpurea v1.0 10378   chr15: 19028901-19039278
evm_27.TU.AmTr_v1.0_scaffold00022.105 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) A. trichopoda v1.0 10385   AmTr_v1.0_scaffold00022: 1477675-1488059
Traes_6AS_FA72332F1 (1 of 6) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) T. aestivum v2.2 7837   ta_iwgsc_6as_v1_4380692: 2-7838
Eucgr.F01825 (1 of 1) PF00270//PF00271//PF02889//PF04851 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) // Type III restriction enzyme, res subunit (ResIII) E. grandis v2.0 8898   Chr06: 24445148-24454045
Prupe.6G358100 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) P. persica v2.1 8007   Pp06: 30324933-30332939
GSMUA_Achr3G29700_001 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) M. acuminata v1 7842   chr3: 28735362-28743203
Manes.18G005100 (1 of 1) PF00270//PF00271//PF02889//PF04851 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) // Type III restriction enzyme, res subunit (ResIII) M. esculenta v6.1 9032   Chromosome18: 525493-534524
Kalax.0368s0026 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) K. laxiflora v1.1 8218   scaffold_368: 174991-183208
Sphfalx0070s0073 (1 of 2) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) S. fallax v0.5 8625   super_70: 1091944-1100568
Seita.1G005500 (1 of 3) PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63) S. italica v2.2 8882   scaffold_1: 366381-375262
Bradi3g00980 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) B. distachyon v3.1 8305   Bd3: 584400-592704

72 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29801.m003082 R. communis v0.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Cucsa.252390.1 C. sativus v1.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
orange1.1g000114m C. sinensis v1.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
AT1G20960.1 A. thaliana TAIR10 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Thhalv10006525m E. salsugineum v1.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Ciclev10004124m C. clementina v1.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
Ciclev10010890m C. clementina v1.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
Lus10016048 L. usitatissimum v1.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Gorai.011G217300.1 G. raimondii v2.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Thecc1EG045030t1 T. cacao v1.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Migut.N01909.1.p M. guttatus v2.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
Migut.C00343.1.p M. guttatus v2.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
Cagra.6160s0001.1.p C. grandiflora v1.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Glyma.15G253800.1.p G. max Wm82.a2.v1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
Glyma.08G173500.1.p G. max Wm82.a2.v1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
Brara.H01126.1.p B. rapa FPsc v1.3 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Bostr.7128s0687.1.p B. stricta v1.2 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Medtr2g064740.1 M. truncatula Mt4.0v1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
Medtr4g011450.1 M. truncatula Mt4.0v1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 2 5274 Embryophyte
SapurV1A.0168s0170.1.p S. purpurea v1.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
evm_27.model.AmTr_v1.0_scaffold00022.105 A. trichopoda v1.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Traes_6AS_FA72332F1.1 T. aestivum v2.2 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Eucgr.F01825.1.p E. grandis v2.0 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Prupe.6G358100.1.p P. persica v2.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
GSMUA_Achr3P29700_001 M. acuminata v1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Manes.18G005100.1.p M. esculenta v6.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Kalax.0368s0026.1.p K. laxiflora v1.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Sphfalx0070s0073.1.p S. fallax v0.5 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Seita.1G005500.1.p S. italica v2.2 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte
Bradi3g00980.1.p B. distachyon v3.1 121343897 U5 small nuclear ribonucleoprotein helicase, putative 1 5274 Embryophyte