GO Term : GO:0000986 bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding GO

Namespace:  molecular_function Obsolete:  false
description  Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for a bacterial-type RNA polymerase.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

1 Ontology Annotations

GO Term Gene Name
GO:0000986 IPR026262

18 Parents

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0003674 molecular_function Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
GO:1901363 heterocyclic compound binding Interacting selectively and non-covalently with heterocyclic compound.
GO:0097159 organic cyclic compound binding Interacting selectively and non-covalently with an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure.
GO:1990837 sequence-specific double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding.
GO:0000975 regulatory region DNA binding Interacting selectively and non-covalently with a DNA region that regulates a DNA-based process. Such processes include transcription, DNA replication, and DNA repair.
GO:0001067 regulatory region nucleic acid binding Interacting selectively and non-covalently with a nucleic acid region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.
GO:0000976 transcription regulatory region sequence-specific DNA binding Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
GO:0044212 transcription regulatory region DNA binding Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
GO:0000987 core promoter proximal region sequence-specific DNA binding Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to the core promoter. The transcribed region might be described as a gene, cistron, or operon.
GO:0001159 core promoter proximal region DNA binding Interacting selectively and non-covalently with a region of DNA that is in cis with and relatively close to the core promoter. The transcribed region might be described as a gene, cistron, or operon.
GO:0001017 bacterial-type RNA polymerase regulatory region DNA binding Interacting selectively and non-covalently with a DNA region that controls the transcription of a gene or operon by a bacterial-type RNA polymerase. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
GO:0000984 bacterial-type RNA polymerase regulatory region sequence-specific DNA binding Interacting selectively and non-covalently with a sequence of DNA that is part of a regulatory region that controls the transcription of a gene or operon by a bacterial-type RNA polymerase.
GO:0000986 bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for a bacterial-type RNA polymerase.

20 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0000984 GO:0000986
is_a GO:0000987 GO:0000986
is_a GO:0001017 GO:0000986
is_a GO:0097159 GO:0000986
is_a GO:0044212 GO:0000986
is_a GO:0005488 GO:0000986
is_a GO:0043565 GO:0000986
is_a GO:0003674 GO:0000986
is_a GO:0001067 GO:0000986
is_a GO:0000976 GO:0000986
is_a GO:0003676 GO:0000986
is_a GO:0000975 GO:0000986
is_a GO:0003677 GO:0000986
is_a GO:0001159 GO:0000986
is_a GO:1901363 GO:0000986
is_a GO:0003690 GO:0000986
is_a GO:1990837 GO:0000986
has_part GO:0000986 GO:0001131
has_part GO:0000986 GO:0001140
has_part GO:0000986 GO:0001141

1 Synonyms

Name Type
eubacterial-type RNA polymerase regulatory transcription factor sequence-specific DNA binding synonym