Protein Domain : IPR000123

Type:  Family Name:  RNA-directed DNA polymerase (reverse transcriptase), msDNA
Description:  The use of an RNA template to produce DNA, for integration into the host genome and exploitation of a host cell, is a strategy employed in the replication of retroid elements, such as the retroviruses and bacterial retrons. The enzyme catalysing polymerisation is an RNA-directed DNA-polymerase, or reverse trancriptase (RT) (). Reverse transcriptase occurs in a variety of mobile elements, including retrotransposons, retroviruses, group II introns, bacterial msDNAs, hepadnaviruses, and caulimoviruses. The enzymatic reaction leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded DNA) in which a single-stranded DNA branches out from an RNA molecule via a 2',5'-phosphodiester linkage [].Retroviral reverse transcriptase is synthesised as part of the POL polyprotein that contains; an aspartyl protease, a reverse transcriptase, RNase H and integrase. POL polyprotein undergoes specific enzymatic cleavage to yield the mature proteins. The discovery of retroelements in the prokaryotes raises intriguing questions concerning their roles in bacteria and the origin and evolution of reverse transcriptases and whether the bacterial reverse transcriptases are older than eukaryotic reverse transcriptases []. Short Name:  Reverse_transcriptase_msDNA

0 Child Features

2 Contains

DB identifier Type Name
IPR000477 Domain Reverse transcriptase domain
IPR013597 Domain Group II intron, maturase-specific

1 Cross References

Identifier
PR00866

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0003723 IPR000123
GO:0003964 IPR000123
GO:0006278 IPR000123

3 Ontology Annotations

GO Term Gene Name
GO:0003723 IPR000123
GO:0003964 IPR000123
GO:0006278 IPR000123

0 Parent Features

0 Proteins

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1720608
            8828137