Gene : Vocar.0025s0008 V. carteri v2.1

Defline:  (1 of 3) PTHR18952:SF104 - CARBONIC ANHYDRASE-RELATED PROTEIN Genomic Order:  8
Name:  ? Vocar.0025s0008 Secondary Identifier:  ? PAC:32898393

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PWY-241 Volvox carteri pathologic  
Vcarteri PWY-7115 Volvox carteri pathologic  
Vcarteri PWY-7117 Volvox carteri pathologic  
Vcarteri PWYQT-4429 Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0025s0008 0.5kb upstream 0.5kb upstream 5323 true scaffold_25: 117951-123273 Volvox carteri
Vocar.0025s0008 0.5kb upstream 0.5kb upstream 500 false scaffold_25: 117951-118450 Volvox carteri
Vocar.0025s0008 0.5kb downstream 0.5kb downstream 5323 true scaffold_25: 118451-123773 Volvox carteri
Vocar.0025s0008 0.5kb downstream 0.5kb downstream 500 false scaffold_25: 123274-123773 Volvox carteri
Vocar.0025s0008 1.0kb upstream 1.0kb upstream 5823 true scaffold_25: 117451-123273 Volvox carteri
Vocar.0025s0008 1.0kb upstream 1.0kb upstream 1000 false scaffold_25: 117451-118450 Volvox carteri
Vocar.0025s0008 1.0kb downstream 1.0kb downstream 5823 true scaffold_25: 118451-124273 Volvox carteri
Vocar.0025s0008 1.0kb downstream 1.0kb downstream 1000 false scaffold_25: 123274-124273 Volvox carteri
Vocar.0025s0008 2.0kb upstream 2.0kb upstream 6823 true scaffold_25: 116451-123273 Volvox carteri
Vocar.0025s0008 2.0kb upstream 2.0kb upstream 2000 false scaffold_25: 116451-118450 Volvox carteri
Vocar.0025s0008 2.0kb downstream 2.0kb downstream 6823 true scaffold_25: 118451-125273 Volvox carteri
Vocar.0025s0008 2.0kb downstream 2.0kb downstream 2000 false scaffold_25: 123274-125273 Volvox carteri
Vocar.0025s0008 5.0kb upstream 5.0kb upstream 9823 true scaffold_25: 113451-123273 Volvox carteri
Vocar.0025s0008 5.0kb upstream 5.0kb upstream 5000 false scaffold_25: 113451-118450 Volvox carteri
Vocar.0025s0008 5.0kb downstream 5.0kb downstream 9823 true scaffold_25: 118451-128273 Volvox carteri
Vocar.0025s0008 5.0kb downstream 5.0kb downstream 5000 false scaffold_25: 123274-128273 Volvox carteri
Vocar.0025s0008 10.0kb upstream 10.0kb upstream 14823 true scaffold_25: 108451-123273 Volvox carteri
Vocar.0025s0008 10.0kb upstream 10.0kb upstream 10000 false scaffold_25: 108451-118450 Volvox carteri
Vocar.0025s0008 10.0kb downstream 10.0kb downstream 14823 true scaffold_25: 118451-133273 Volvox carteri
Vocar.0025s0008 10.0kb downstream 10.0kb downstream 10000 false scaffold_25: 123274-133273 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098916 5260 Chlorophyte View MSA
123414368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain