Gene : 173197 S. moellendorffii v1.0
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  64
Name:  ? 173197 Secondary Identifier:  ? PAC:15412640
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii ARO-PWY Selaginella moellendorffii pathologic  
Smoellendorffii PWY-6163 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
173197 0.5kb upstream 0.5kb upstream 2837 true scaffold_21: 390946-393782 Selaginella moellendorffii
173197 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 390946-391445 Selaginella moellendorffii
173197 0.5kb downstream 0.5kb downstream 2837 true scaffold_21: 391446-394282 Selaginella moellendorffii
173197 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 393783-394282 Selaginella moellendorffii
173197 1.0kb upstream 1.0kb upstream 3337 true scaffold_21: 390446-393782 Selaginella moellendorffii
173197 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 390446-391445 Selaginella moellendorffii
173197 1.0kb downstream 1.0kb downstream 3337 true scaffold_21: 391446-394782 Selaginella moellendorffii
173197 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 393783-394782 Selaginella moellendorffii
173197 2.0kb upstream 2.0kb upstream 4337 true scaffold_21: 389446-393782 Selaginella moellendorffii
173197 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 389446-391445 Selaginella moellendorffii
173197 2.0kb downstream 2.0kb downstream 4337 true scaffold_21: 391446-395782 Selaginella moellendorffii
173197 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 393783-395782 Selaginella moellendorffii
173197 5.0kb upstream 5.0kb upstream 7337 true scaffold_21: 386446-393782 Selaginella moellendorffii
173197 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 386446-391445 Selaginella moellendorffii
173197 5.0kb downstream 5.0kb downstream 7337 true scaffold_21: 391446-398782 Selaginella moellendorffii
173197 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 393783-398782 Selaginella moellendorffii
173197 10.0kb upstream 10.0kb upstream 12337 true scaffold_21: 381446-393782 Selaginella moellendorffii
173197 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 381446-391445 Selaginella moellendorffii
173197 10.0kb downstream 10.0kb downstream 12337 true scaffold_21: 391446-403782 Selaginella moellendorffii
173197 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 393783-403782 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121316955 5274 Embryophyte Singleton cluster - no MSA
123354059 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain