Gene : evm_27.TU.AmTr_v1.0_scaffold00090.95 A. trichopoda v1.0

Defline:  (1 of 1) KOG4615 - Uncharacterized conserved protein Genomic Order:  92
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00090.95 Secondary Identifier:  ? PAC:31575053

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00090.95 0.5kb upstream 0.5kb upstream 19119 true AmTr_v1.0_scaffold00090: 2498214-2517332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00090: 2516833-2517332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 0.5kb downstream 0.5kb downstream 19119 true AmTr_v1.0_scaffold00090: 2497714-2516832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00090: 2497714-2498213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 1.0kb upstream 1.0kb upstream 19619 true AmTr_v1.0_scaffold00090: 2498214-2517832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00090: 2516833-2517832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 1.0kb downstream 1.0kb downstream 19619 true AmTr_v1.0_scaffold00090: 2497214-2516832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00090: 2497214-2498213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 2.0kb upstream 2.0kb upstream 20619 true AmTr_v1.0_scaffold00090: 2498214-2518832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00090: 2516833-2518832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 2.0kb downstream 2.0kb downstream 20619 true AmTr_v1.0_scaffold00090: 2496214-2516832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00090: 2496214-2498213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 5.0kb upstream 5.0kb upstream 23619 true AmTr_v1.0_scaffold00090: 2498214-2521832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00090: 2516833-2521832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 5.0kb downstream 5.0kb downstream 23619 true AmTr_v1.0_scaffold00090: 2493214-2516832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00090: 2493214-2498213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 10.0kb upstream 10.0kb upstream 28619 true AmTr_v1.0_scaffold00090: 2498214-2526832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00090: 2516833-2526832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 10.0kb downstream 10.0kb downstream 28619 true AmTr_v1.0_scaffold00090: 2488214-2516832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.95 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00090: 2488214-2498213 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045575 5273 Angiosperm View MSA
121346105 5274 Embryophyte View MSA
123380331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain