Gene : evm_27.TU.AmTr_v1.0_scaffold00078.68 A. trichopoda v1.0
Defline:  (1 of 4) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  68
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00078.68 Secondary Identifier:  ? PAC:31555217
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda COA-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00078.68 0.5kb upstream 0.5kb upstream 3196 true AmTr_v1.0_scaffold00078: 1161761-1164956 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00078: 1164457-1164956 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 0.5kb downstream 0.5kb downstream 3196 true AmTr_v1.0_scaffold00078: 1161261-1164456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00078: 1161261-1161760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 1.0kb upstream 1.0kb upstream 3696 true AmTr_v1.0_scaffold00078: 1161761-1165456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00078: 1164457-1165456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 1.0kb downstream 1.0kb downstream 3696 true AmTr_v1.0_scaffold00078: 1160761-1164456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00078: 1160761-1161760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 2.0kb upstream 2.0kb upstream 4696 true AmTr_v1.0_scaffold00078: 1161761-1166456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00078: 1164457-1166456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 2.0kb downstream 2.0kb downstream 4696 true AmTr_v1.0_scaffold00078: 1159761-1164456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00078: 1159761-1161760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 5.0kb upstream 5.0kb upstream 7696 true AmTr_v1.0_scaffold00078: 1161761-1169456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00078: 1164457-1169456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 5.0kb downstream 5.0kb downstream 7696 true AmTr_v1.0_scaffold00078: 1156761-1164456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00078: 1156761-1161760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 10.0kb upstream 10.0kb upstream 12696 true AmTr_v1.0_scaffold00078: 1161761-1174456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00078: 1164457-1174456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 10.0kb downstream 10.0kb downstream 12696 true AmTr_v1.0_scaffold00078: 1151761-1164456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.68 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00078: 1151761-1161760 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain