Gene : evm_27.TU.AmTr_v1.0_scaffold00064.50 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10048:SF15 - PHOSPHATIDYLINOSITOL 4-KINASE ALPHA-LIKE PROTEIN P2-RELATED Genomic Order:  50
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00064.50 Secondary Identifier:  ? PAC:31567240
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6351 Amborella trichopoda pathologic  
Atrichopoda PWY-6352 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00064.50 0.5kb upstream 0.5kb upstream 88541 true AmTr_v1.0_scaffold00064: 1806314-1894854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00064: 1806314-1806813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 0.5kb downstream 0.5kb downstream 88541 true AmTr_v1.0_scaffold00064: 1806814-1895354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00064: 1894855-1895354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 1.0kb upstream 1.0kb upstream 89041 true AmTr_v1.0_scaffold00064: 1805814-1894854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00064: 1805814-1806813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 1.0kb downstream 1.0kb downstream 89041 true AmTr_v1.0_scaffold00064: 1806814-1895854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00064: 1894855-1895854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 2.0kb upstream 2.0kb upstream 90041 true AmTr_v1.0_scaffold00064: 1804814-1894854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00064: 1804814-1806813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 2.0kb downstream 2.0kb downstream 90041 true AmTr_v1.0_scaffold00064: 1806814-1896854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00064: 1894855-1896854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 5.0kb upstream 5.0kb upstream 93041 true AmTr_v1.0_scaffold00064: 1801814-1894854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00064: 1801814-1806813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 5.0kb downstream 5.0kb downstream 93041 true AmTr_v1.0_scaffold00064: 1806814-1899854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00064: 1894855-1899854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 10.0kb upstream 10.0kb upstream 98041 true AmTr_v1.0_scaffold00064: 1796814-1894854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00064: 1796814-1806813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 10.0kb downstream 10.0kb downstream 98041 true AmTr_v1.0_scaffold00064: 1806814-1904854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00064.50 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00064: 1894855-1904854 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046398 5273 Angiosperm View MSA
121350852 5274 Embryophyte View MSA
123425493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain