Gene : evm_27.TU.AmTr_v1.0_scaffold00065.69 A. trichopoda v1.0
Defline:  (1 of 1) 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Genomic Order:  68
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00065.69 Secondary Identifier:  ? PAC:31553769
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00065.69 0.5kb upstream 0.5kb upstream 27165 true AmTr_v1.0_scaffold00065: 1524229-1551393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00065: 1524229-1524728 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 0.5kb downstream 0.5kb downstream 27165 true AmTr_v1.0_scaffold00065: 1524729-1551893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00065: 1551394-1551893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 1.0kb upstream 1.0kb upstream 27665 true AmTr_v1.0_scaffold00065: 1523729-1551393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00065: 1523729-1524728 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 1.0kb downstream 1.0kb downstream 27665 true AmTr_v1.0_scaffold00065: 1524729-1552393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00065: 1551394-1552393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 2.0kb upstream 2.0kb upstream 28665 true AmTr_v1.0_scaffold00065: 1522729-1551393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00065: 1522729-1524728 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 2.0kb downstream 2.0kb downstream 28665 true AmTr_v1.0_scaffold00065: 1524729-1553393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00065: 1551394-1553393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 5.0kb upstream 5.0kb upstream 31665 true AmTr_v1.0_scaffold00065: 1519729-1551393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00065: 1519729-1524728 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 5.0kb downstream 5.0kb downstream 31665 true AmTr_v1.0_scaffold00065: 1524729-1556393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00065: 1551394-1556393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 10.0kb upstream 10.0kb upstream 36665 true AmTr_v1.0_scaffold00065: 1514729-1551393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00065: 1514729-1524728 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 10.0kb downstream 10.0kb downstream 36665 true AmTr_v1.0_scaffold00065: 1524729-1561393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00065.69 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00065: 1551394-1561393 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046212 5273 Angiosperm View MSA
121345498 5274 Embryophyte View MSA
123427980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain