Gene : evm_27.TU.AmTr_v1.0_scaffold00059.20 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13930 - RSAFD1-RELATED Genomic Order:  20
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.20 Secondary Identifier:  ? PAC:31565889
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7283 Amborella trichopoda pathologic  
Atrichopoda PWY-7286 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.20 0.5kb upstream 0.5kb upstream 6226 true AmTr_v1.0_scaffold00059: 290023-296248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 290023-290522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 0.5kb downstream 0.5kb downstream 6226 true AmTr_v1.0_scaffold00059: 290523-296748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 296249-296748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 1.0kb upstream 1.0kb upstream 6726 true AmTr_v1.0_scaffold00059: 289523-296248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 289523-290522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 1.0kb downstream 1.0kb downstream 6726 true AmTr_v1.0_scaffold00059: 290523-297248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 296249-297248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 2.0kb upstream 2.0kb upstream 7726 true AmTr_v1.0_scaffold00059: 288523-296248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 288523-290522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 2.0kb downstream 2.0kb downstream 7726 true AmTr_v1.0_scaffold00059: 290523-298248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 296249-298248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 5.0kb upstream 5.0kb upstream 10726 true AmTr_v1.0_scaffold00059: 285523-296248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 285523-290522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 5.0kb downstream 5.0kb downstream 10726 true AmTr_v1.0_scaffold00059: 290523-301248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 296249-301248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 10.0kb upstream 10.0kb upstream 15726 true AmTr_v1.0_scaffold00059: 280523-296248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 280523-290522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 10.0kb downstream 10.0kb downstream 15726 true AmTr_v1.0_scaffold00059: 290523-306248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.20 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 296249-306248 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain