Gene : evm_27.TU.AmTr_v1.0_scaffold00057.283 A. trichopoda v1.0
Defline:  (1 of 3) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Genomic Order:  281
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.283 Secondary Identifier:  ? PAC:31574213
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.283 0.5kb upstream 0.5kb upstream 7368 true AmTr_v1.0_scaffold00057: 4424597-4431964 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 4431465-4431964 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 0.5kb downstream 0.5kb downstream 7368 true AmTr_v1.0_scaffold00057: 4424097-4431464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 4424097-4424596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 1.0kb upstream 1.0kb upstream 7868 true AmTr_v1.0_scaffold00057: 4424597-4432464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 4431465-4432464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 1.0kb downstream 1.0kb downstream 7868 true AmTr_v1.0_scaffold00057: 4423597-4431464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 4423597-4424596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 2.0kb upstream 2.0kb upstream 8868 true AmTr_v1.0_scaffold00057: 4424597-4433464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 4431465-4433464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 2.0kb downstream 2.0kb downstream 8868 true AmTr_v1.0_scaffold00057: 4422597-4431464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 4422597-4424596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 5.0kb upstream 5.0kb upstream 11868 true AmTr_v1.0_scaffold00057: 4424597-4436464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 4431465-4436464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 5.0kb downstream 5.0kb downstream 11868 true AmTr_v1.0_scaffold00057: 4419597-4431464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 4419597-4424596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 10.0kb upstream 10.0kb upstream 16868 true AmTr_v1.0_scaffold00057: 4424597-4441464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 4431465-4441464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 10.0kb downstream 10.0kb downstream 16868 true AmTr_v1.0_scaffold00057: 4414597-4431464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.283 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 4414597-4424596 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain